Pseudomonas glycinae: AWU82_18240
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Entry
AWU82_18240 CDS
T06994
Name
(GenBank) RNA 2',3'-cyclic phosphodiesterase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
pgy
Pseudomonas glycinae
Brite
KEGG Orthology (KO) [BR:
pgy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pgy03016
]
AWU82_18240
Enzymes [BR:
pgy01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
AWU82_18240
Transfer RNA biogenesis [BR:
pgy03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
AWU82_18240
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
Acb1
Motif
Other DBs
NCBI-ProteinID:
AMQ85165
LinkDB
All DBs
Position
complement(2501767..2502306)
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AA seq
179 aa
AA seq
DB search
MTDETRGDQPFKRLFFALDCPPAQRKAIAQWRSELGLRTGKPVPADNFHLTLLFLGAVPL
AQIGEVCEAAAKVRIPGEALRISLDRLQVWRRAGVLSLAPEQAPQALLRLVYALEQAMLP
FGFEEATREYRPHLTLARDYRAPEPESATPPEFFLRAERFALFESHKGRYRALADWPLI
NT seq
540 nt
NT seq
+upstream
nt +downstream
nt
atgacggacgaaacgcgcggggatcaaccgttcaagcggctgtttttcgccctggactgc
ccgccggcgcagcgcaaggcgattgcccagtggcgcagcgagctgggtttgcgtaccggc
aaaccggtgccggccgacaactttcacctgacgttgctgtttctcggcgcggtgccgttg
gcgcagattggcgaagtctgtgaggcggcggcgaaggtgcgcataccgggcgaggcgctg
aggatttcgctggatcggttgcaggtctggcgacgtgccggggtgttgtcgctggcaccg
gagcaggcgccgcaggcattgctgcgactggtgtatgcactggagcaggcgatgttgccg
ttcgggtttgaagaggcaacgcgggagtaccgtccgcacctgacgctggcccgggactat
cgcgcgccggaaccggaatccgccacgccgccggaattcttcctgcgggccgaacgcttc
gcgcttttcgaatcccacaagggccgctaccgcgcgctggccgattggccactgatctga
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