Pseudomonas glycinae: AWU82_18890
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Entry
AWU82_18890 CDS
T06994
Name
(GenBank) DNA repair protein RecO
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
pgy
Pseudomonas glycinae
Pathway
pgy03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pgy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
AWU82_18890
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pgy03400
]
AWU82_18890
DNA repair and recombination proteins [BR:
pgy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
AWU82_18890
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
AWU82_18890
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecO_C
RecO_N
Motif
Other DBs
NCBI-ProteinID:
AMQ85287
UniProt:
A0ABM5ZNL9
LinkDB
All DBs
Position
3242315..3243004
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AA seq
229 aa
AA seq
DB search
MSQSPPPAQPAYVLHSRAYRETSALVDFLTPQGRLRAVLRSARGKAGTLARPFVPLEVEF
RGKGELKNVGRMESVGNATWMVGEALFSGLYLNELLIRLLPAEDPHPAVFEHYAATLLAL
AEGRPLEPLLRSFEWRLLDDLGYGFSLNIDINDDPIAADGLYRLQVDAGLERVYLLQPGL
FNGTELLAMAEADWSAPGALSAAKRLMRQALAVHLGGRPLVSRELFRKP
NT seq
690 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcaaagcccgcctcccgcccaacccgcctacgtcctccactcacgcgcctaccgc
gaaaccagcgcgctggtggacttcctcacgccgcaaggtcggctgcgggcggtgttgcgc
agtgcgcggggcaaggccgggacgctggcgcggccattcgtgccgctggaagtggagttt
cgcggcaagggtgagttgaagaatgtcgggcgcatggagagtgtcgggaatgcaacctgg
atggtcggcgaggcgctgttcagcggcttgtatctcaatgagctgctgattcgcctgttg
cccgccgaagacccgcatcctgcggtgttcgaacattacgctgccacgttgctggcattg
gccgaagggcggccactggagccgctgctgcgttccttcgaatggcggctgctcgacgat
ctcggttacggtttttcccttaatatcgatatcaacgacgatcccatcgctgcggatggc
ctctaccgtttgcaggtggatgccgggctcgagcgggtctacctgttgcaacccggtctg
ttcaacggcaccgaactgctggccatggccgaagccgactggtcggctcccggcgcgttg
tccgccgccaagcgactgatgcgccaagccttggcggtgcatctgggcggtcgtcccctc
gtcagtcgagagctgtttcgcaagccctga
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