Pseudomonas glycinae: AWU82_20365
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Entry
AWU82_20365 CDS
T06994
Symbol
recC
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
pgy
Pseudomonas glycinae
Pathway
pgy03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pgy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
AWU82_20365 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pgy03400
]
AWU82_20365 (recC)
Enzymes [BR:
pgy01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
AWU82_20365 (recC)
DNA repair and recombination proteins [BR:
pgy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
AWU82_20365 (recC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
AMQ85568
LinkDB
All DBs
Position
complement(4319292..4322744)
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AA seq
1150 aa
AA seq
DB search
MPDTQSLNAAFMVVQSNSLDELRSLVISIMRRYPLAPLENEIALVQSNGIAQWLKLALAE
DPEAEDSGGCGIAAAIDVQLPGSFMWQLYRMVLGREEIPAKSLLDKAPLTWRLMRLLPQV
INRPHFEPLQRFLTHDTDLRKRYQLSERLADLFDQYQVYRADWLEDWAEGHHQLRNVRGE
AKPLSPTSCWQAELWRALLDDVGEQGMAQSRAGVHQRFMERINSLESAPNGLPQRVIVFG
ISSLPAQVLEALAGLSRFSQVLLCVHNPCRYHWADIVADKDLLRHQYKRQARKNGMPVVL
DSESLHQHAHPLLAAWGKQGRDYINLLDSYDEPDSYRAAFRNGRIDLFSEHQPKNMLNQL
QDDILELRPLSETRALWPAVDLTQDDSIRFHIAHSAQREVEILHDQLLARFSANPQLRPR
DVIVMVPDIDSYAPHIRAVFGQLDRHDPRFIPFTMADQGQRGRDPLLIAVEHLLKLPDSR
FPVSEILDLLDVPALRARFGVQERDLPTLHRWIEGAGVRWGIDAGQRAELGLPDELEQNS
WRFGLRRMLLGYAVGSSGACGDIEPYDEIGGLDAALIGPLVALLDALELSHQQLMTPAQP
WEWGDRLQALMLLFFKPENEHDDYLLAQLEELRETWLETCEAVGLLDELPLTVVREAWLA
GLDQGRLSQRFLAGAVNFCTLMPMRAIPFRLVCLLGMNDGDYPRAQPPLDFDLMGSDYRP
GDRSRREDDRYLLLEALLSARHQLYISWVGRSIRDNSERPASVLIGQLRDHLANGWRSVD
DNEDLLIAMTQEHPLQPFSSRYFHEEDKLFSYASEWQVLHQHHEQNDVATMLAPHVQEEP
LSLELLQDFLRNPVRHFFTQRLKVYFEAAQVPQADEEPFVLDALQRYVLSDSLLGAALRH
PDNVDQALESQARRLQNSGLLPMAGFGECLQRELIEPLPDLLQRHQQLLALWPTPLTNAL
PINFEWQELRLEGWLGGLHRRADGGVLSVTTIPNSIGSIKSRKWHRLTKPWVSHLVACAS
GLSLTTALVASDDTLLLEPLEQPRAGRILEDLLLAWQTGMRQPLPVAVKTAFAWLAQTDP
VKAEAAARKAYEGDGQTSEGERRESPALSRQFADFDALQADETFSGWCDALYRPLLEAPW
RSWTHEEAGA
NT seq
3453 nt
NT seq
+upstream
nt +downstream
nt
atgccggacacccagtccctcaacgctgcattcatggtcgttcagagcaacagcctggat
gaactgcgcagccttgtgatcagcatcatgcggcgctatccgctggcacccttggagaat
gaaattgcgctcgtgcagagtaacggtatcgctcaatggctcaagctggccctggctgaa
gatcctgaagcagaagattcaggcggctgtggtatcgccgctgctattgatgtgcaactg
ccgggcagtttcatgtggcagctttaccggatggtgctggggcgagaagaaattccggca
aagtcgttgctcgacaaggcaccgttgacatggcgcctgatgcgcttgttgccacaggta
atcaaccgtccgcatttcgaaccgctacaacgcttcctcacccatgacaccgatctacgc
aaacgctaccagttatccgagcgtctggcagacctcttcgaccaataccaggtttaccgc
gctgattggcttgaggactgggcagaggggcatcatcaactccgcaatgtaagaggtgaa
gcgaagccgctctcaccgaccagttgctggcaggcagaattgtggcgcgctctgctggac
gacgtgggcgagcaaggcatggcccaaagccgggcaggcgtgcatcagcgattcatggaa
cgcatcaacagtcttgaaagcgcaccgaacggacttccccagcgagtaatcgtttttgga
atttcctcgttgcccgcacaagtacttgaagcgttggccgggctttcccgtttcagccag
gttttgttgtgcgtccataacccctgtcgttatcactgggccgatatcgttgccgacaag
gatctactacgtcatcagtacaagcgacaagcccgcaaaaacggcatgcctgtggtgctg
gactcggaatcactccaccaacatgctcacccgctcctcgctgcatggggtaagcaaggt
cgtgattacatcaaccttctcgacagttacgacgagccggacagctatcgcgcagcattt
cgcaatgggcgtattgatctgttcagcgaacaccagccgaagaacatgctcaatcagtta
caggacgacattctggaactgcggccgctcagcgagactcgtgcgctctggccggcagtc
gatctcactcaagacgattcgatccgctttcatatcgcccatagcgcccagcgcgaggtt
gagattctccacgaccagttgctggcccgtttcagtgccaaccctcaattacgcccgcgc
gacgtgatcgtgatggtgcctgacatcgatagttatgcgccgcatattcgcgccgtattt
gggcagcttgatcgtcatgacccacgcttcattcccttcaccatggccgatcagggccag
cgcggacgggatccattgctgatcgctgtcgagcatctgctcaagctgcctgacagtcgt
tttcccgtcagtgagatcctcgacctgctcgacgttcctgcgttacgcgccagatttggt
gtgcaggagcgagacttgccgaccctgcatcgctggattgaaggtgctggcgtgcgttgg
ggaatcgatgccgggcaacgggccgagctgggattgcccgacgaactggagcaaaacagt
tggcgctttggcttgcgccggatgctgctcggttatgccgtcggcagttccggggcctgt
ggggatatcgagccgtacgacgaaatcggtggtctcgatgccgcgctgatcggcccattg
gtagcgttgctggatgcactggaactttcgcatcagcaactgatgacgcccgcgcaacca
tgggagtggggggatcggcttcaggccctgatgctgctgtttttcaaacccgaaaatgag
catgacgactacttgctcgctcaactcgaagagctacgggaaacctggctggaaacctgc
gaagccgtcggtctgttggacgagttgccactgaccgtagtccgtgaggcctggttggcg
ggactggatcagggtcgcctgtcgcagcgtttcctggcgggagccgtgaacttttgcacg
ctgatgccgatgcgcgcgatcccgttcaggctggtttgcctgctgggcatgaacgatggc
gattatccacgtgctcaaccgccgctggacttcgacctcatgggcagcgactaccggccg
ggagatcgctcccgtcgggaggatgatcgctatcttctgcttgaagcgcttttgtccgcc
cgtcatcagctctacatcagctgggtcggccgcagcattcgcgacaacagtgagcggccc
gcctctgtgttgatcggccagttgcgcgatcatctcgccaatggatggcgatcggtcgac
gacaacgaagatctcctgattgcgatgactcaggagcatccgttgcagccattcagttcg
cgctacttccatgaggaagacaagctgttcagctacgccagcgaatggcaggtgctgcat
caacatcacgaacagaatgacgtcgcaacaatgcttgccccccatgtccaggaggaaccg
ttgagtctggaactgctacaggacttcctgcgcaatccggtccgacactttttcactcag
cgactcaaggtttacttcgaagcggcgcaggtacctcaggctgacgaggaaccctttgta
ctggatgcgttgcagcgatacgtgctcagcgacagcttgctcggagcagccttgagacac
ccggataatgttgatcaggcactcgagtctcaagcccgacgcctgcagaacagcggactt
ttgcccatggccgggttcggtgaatgccttcaacgagagctgatcgagcctttgccagac
ttgttgcaacgacatcaacagctgttggcgttatggccaacacccctgaccaacgcccta
ccgatcaatttcgaatggcaggaactgcgccttgaaggatggttgggaggtttgcaccgg
cgcgccgatggcggcgtactgtcggtcacaacaatccccaacagcataggctcgatcaag
agccgcaaatggcatcgcctgaccaagccctgggtcagccatcttgtcgcgtgcgccagt
ggtctttccctgacgacagcactggtggccagtgatgacacgctcctgcttgaacctctg
gaacagccccgggcgggccgaattctcgaggatctgctgctcgcctggcagacgggtatg
cgccagccacttccggtcgcggtaaaaacggcttttgcatggctggctcagaccgatccg
gtcaaggctgaagcggctgcccgcaaagcctatgaaggcgatggtcagaccagcgaaggc
gagcggcgtgaaagcccggctctgtcccgacaattcgccgacttcgatgcactgcaggcg
gatgaaaccttctccggttggtgtgatgcactgtatcgccctttgcttgaggcaccgtgg
cgctcatggacccacgaggaggcaggcgcatga
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integrated database retrieval system
