Pseudomonas glycinae: AWU82_23320
Help
Entry
AWU82_23320 CDS
T06994
Symbol
rnd
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
pgy
Pseudomonas glycinae
Brite
KEGG Orthology (KO) [BR:
pgy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pgy03016
]
AWU82_23320 (rnd)
Enzymes [BR:
pgy01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
AWU82_23320 (rnd)
Transfer RNA biogenesis [BR:
pgy03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
AWU82_23320 (rnd)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
RNAseD_HRDC_C
Motif
Other DBs
NCBI-ProteinID:
AMQ86131
LinkDB
All DBs
Position
complement(4400494..4401627)
Genome browser
AA seq
377 aa
AA seq
DB search
MAIDIHWIRDNDSLAQFCAEWQQLPFVALDTEFMRVDTFYPIAGLLQVGDGKRAYLIDPL
TINAWQPLAALLENPAVLKVLHACSEDLEVLLRLTGSLPAPLFDTQLAAAYLNLGFSMGY
SRLVQEVLGIELPKGETRSDWLQRPLSDTQISYAAEDAVHLAEVFVQLRPKLSDDKFAWV
LEDGAELVANLRRETDPYEVYREAKLAWKLSRAQLAVLRELCAWREREARARDLPRNRIV
REHSLWPLARTQPDNLSALGKIEDMHPRTVRQDGEFLLDLIKRSGSVGPDQWPPAVPEPL
PIEAAALIKQLRALGQAEAERLGIAPELMLRKKTLEALVKSGFPEGPYQLPDSLRGWRRE
LMGQKLLDSLATAGEQP
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
gtggccatcgatattcactggattcgcgacaacgatagcctcgcgcagttttgcgccgag
tggcagcagctgccgttcgttgccctcgacaccgaattcatgcgggtcgacaccttctat
ccgattgccggcctgttgcaggttggcgacggcaaacgcgcctacctgatcgacccgctg
accatcaacgcctggcaacccttggccgcgctgctggaaaacccggcggtgctcaaagtc
ctgcacgcctgcagcgaagacctcgaagttctgctgcgcctgaccggcagcctgccggcg
ccgctgttcgacacccaactggccgctgcctacctgaacctcgggttctcgatgggctat
tcgcgtctggtgcaggaagtgctgggcatcgaactgccgaagggcgaaacccggtccgac
tggttgcagcgtccgttgtccgacacgcaaatcagctatgccgccgaagacgccgtgcat
ctggcggaggttttcgtacaactgcgtccgaaactgtccgacgacaaattcgcctgggtg
ctggaggacggcgccgaactggtcgccaacctgcgccgcgagaccgatccgtacgaggtg
tatcgcgaggccaaactggcgtggaagctgtcccgcgcccaactggctgtgctgcgcgaa
ttgtgcgcctggcgcgagcgcgaggcccgcgcccgcgacctgccgcgcaatcgcatcgtg
cgtgaacactcgctgtggccgctggcccggacccaaccggacaacctcagcgcgctgggc
aagatcgaagacatgcacccgcgtaccgtgcgtcaggacggcgagtttctgcttgatctg
atcaagcgctctggcagtgtggggcctgatcaatggccgccagccgtgccggagccgttg
ccgatcgaagccgccgcgctgatcaaacagctgcgggcgctcggtcaggccgaagctgag
cgtctgggcatcgcgccggaactgatgctgcgcaagaaaaccctcgaagcgctggtcaaa
agcggcttccccgagggtccttaccaattgcctgattcgctgcgtggctggcgccgcgaa
ttgatgggccagaagctgctcgacagcctggccaccgccggagaacagccttga
DBGET
integrated database retrieval system
