Mixta gaviniae: C2E15_02200
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Entry
C2E15_02200 CDS
T05418
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
pgz
Mixta gaviniae
Pathway
pgz03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pgz00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
C2E15_02200
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pgz03021
]
C2E15_02200
03400 DNA repair and recombination proteins [BR:
pgz03400
]
C2E15_02200
Enzymes [BR:
pgz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
C2E15_02200
Transcription machinery [BR:
pgz03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
C2E15_02200
DNA repair and recombination proteins [BR:
pgz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
C2E15_02200
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
Motif
Other DBs
NCBI-ProteinID:
AUX92034
UniProt:
A0A1X1E3X4
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All DBs
Position
487826..488815
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AA seq
329 aa
AA seq
DB search
MQGSVTEFLKPRLVDIEQLSSTHAKVTLEPLERGFGHTLGNALRRILLSSMPGCAVTEVE
IDGVLHEYSTKEGVQEDILEILLNLKGLAVRVQGKDEVIITLNKSGIGPVTAADITHDGD
VEIVKPQHVICHLTDENASISMRIKVQRGRGYVPASARIHSEEDERPIGRLLVDACYSPV
DRIAYNVEAARVEQRTDLDKLVIEMETNGTIDPEEAIRRAATILAEQLEAFVDLRDVRQP
EVKEEKPEFDPILLRPVDDLELTVRSANCLKAEAIHYIGDLVQRTEVELLKTPNLGKKSL
TEIKDVLASRGLSLGMRLENWPPASIADE
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgcagggttctgtgacagagtttctaaaaccgcgcctggtagatatcgagcaattgagt
tcgacgcacgccaaggtgacccttgagcctttagagcgtggctttggccatactcttggt
aacgcactgcgccgtattctgctgtcatccatgccgggttgcgcggtgaccgaggttgag
attgatggtgtacttcatgagtacagcacaaaagagggcgtacaggaagatatcctggaa
atcctgcttaacctgaaagggctggcggtaagagttcagggtaaagatgaagtcatcatt
actctgaataaatctggcattggccctgtgactgcagccgacatcacccatgatggtgat
gtcgaaatcgtcaagccgcagcacgtgatctgccatctgaccgatgaaaacgcatctatt
agcatgcgcatcaaagttcagcgtggccgtggttatgtgccggcttctgcccgaattcat
tcggaagaagatgagcgcccaatcggccgtctgttggtcgacgcctgctacagccctgta
gaccgtatcgcctacaatgttgaagctgcgcgtgtagaacagcgtaccgacctggataag
ctggtcatcgagatggaaaccaacggcactatcgatcctgaagaggcgattcgtcgtgcg
gctaccattctggctgaacaactggaagctttcgttgacctgcgtgatgtacgtcagccg
gaagttaaagaagagaaaccagaattcgatccgatcctgctgcgccctgttgacgatctg
gaattgactgtccgctctgctaactgcctcaaggcagaagctatccactacatcggtgat
ctggtacagcgtaccgaggttgagctacttaaaacgcctaacctgggtaaaaaatctctt
accgagattaaagatgtgcttgcttcacgtggtctgtctctgggcatgcgcctggaaaac
tggccgccggcaagcattgctgatgaataa
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