Mixta gaviniae: C2E15_02395
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Entry
C2E15_02395 CDS
T05418
Name
(GenBank) RNase E specificity factor CsrD
KO
K18765
RNase E specificity factor CsrD
Organism
pgz
Mixta gaviniae
Brite
KEGG Orthology (KO) [BR:
pgz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pgz03019
]
C2E15_02395
Messenger RNA biogenesis [BR:
pgz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
C2E15_02395
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GFIT
Motif
Pfam:
EAL
GGDEF
GAPES4
HemY_N
DUF948
Motif
Other DBs
NCBI-ProteinID:
AUX92063
UniProt:
A0A2L0IBW7
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All DBs
Position
521526..523475
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AA seq
649 aa
AA seq
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MRLTTKLSAFVTLLITLAMVLMLVGSALSFFWLRSERVEKQVQSLMTEIDQALLTKSAAE
LTPWLQRTMPLMDIEQLQIREQQNVILNLSRHQHPLIDDEPNRFRRYDLPLLHQQGWTLR
VELLDPANTWFRSYVGSSTLVVVLLVAAIMMLLLLPTHRWLWRQLKGMESLEARAARIIE
GERRGIGRGNVNEWPPKASTAIDLLLDDLHEAREQRTRIDTLIRAFTAQDAATGLNNRLF
FDNQLATLLEDQEKVGTHGVVMMIRLPDFDSLSEEWGHAPVQEYLFALVNMLSTFVMRYP
GALLARYFRSDFMVLLPHRTLKEADGIAAQLVKAVDALPPTAMIDRQNMLHIGISAWRSG
QTTQQVMESVEQATRHASLQGGNSWVTGEGTPSDGGRGSVKWRTLLEHTLKRGGPRLYQK
PAVLRDGRVHHRELLPRIYDGEKELLAAEFMPLVQQMGLAEAYDRQLMQRILTLSACWPQ
ETLAVPITIDSLLQPGFQRVLRDMLLQCTKSQRQRFLFELAEAEVCQHFNRLQPALRLLQ
GFGCRLAVNQAGLTVVSTAYITLAGVELIKLHPSLVRNIDRRTENQLFVKSLLEVCRMTP
TQIFAAGVRTRDEWQTLSALGVAGGQGDFFSTSQLVNSNVKKYSQRVRV
NT seq
1950 nt
NT seq
+upstream
nt +downstream
nt
atgcgattaaccacaaaactgtcagcgtttgtcacgctgcttatcactctggcaatggtg
ttaatgctggtcggcagcgcattgagctttttctggctgcgcagcgagcgcgtggaaaaa
caggtgcagtcgctgatgacggaaatcgatcaggcactgctgacgaaaagcgccgccgag
cttacgccctggctgcagcgcaccatgccgctgatggatatcgaacagctgcagatccgc
gaacagcaaaacgttattcttaatctttcgcgtcatcaacatccgctgatcgatgacgaa
cccaaccgcttccgtcgttacgacctgccgctgctgcatcagcagggctggacgctgcgc
gtggagctgctcgatccggccaatacctggtttcgttcctatgtcggctcttcaaccctg
gtggtggtgctgctggtggcggcgatcatgatgctgctgctgctgcccacgcatcgctgg
ctgtggcgccagctgaaagggatggaaagcctggaggcgcgcgccgcgcgcattattgaa
ggcgaacgccgcggcatcgggcgcggcaatgtcaacgaatggccgccgaaagcgtcgacg
gcgattgacctgctgctggacgatcttcatgaggcgcgcgaacagcgcacccgcatcgat
accctgattcgcgcttttaccgcgcaagatgccgccaccggcctgaataaccggctcttt
tttgataatcagctggcgacgctgctggaagatcaggagaaggtcggcacgcacggcgta
gtgatgatgatccgcctgcccgatttcgacagcctgagcgaggagtggggccatgccccg
gtgcaggagtatctgtttgcgctggtgaatatgctctccacctttgtgatgcgctatccc
ggcgcgctgctggcgcgctatttccgcagcgactttatggtgctgctgccgcatcgcacc
ttaaaagaggctgacggtattgccgcccagctggttaaagcggtggacgcgctgccgccg
acggcgatgatcgatcggcagaatatgctgcatatcggcatcagcgcctggcgcagcggg
caaaccacgcaacaggtgatggagagcgtggaacaggcgacgcgtcacgcctcgctgcag
ggcggcaacagctgggtcaccggtgaagggacgcccagcgatggcggacgcggcagcgta
aaatggcgcacgctgctggaacataccctgaaacgcggcggcccgcgactttaccaaaag
cctgcggtgctgcgcgacggccgcgtgcatcatcgtgaactgctgccgcgcatctatgac
ggcgagaaagagctgctggcggcggagtttatgccgctggtgcagcagatggggctggcg
gaggcgtacgaccgccagctgatgcagcgcatcctgacgctttccgcctgctggccgcag
gaaacgctggcggtgcccattaccattgactctttactgcagcccggctttcagcgcgtc
ctgcgcgatatgctgctgcagtgtacaaaatcgcagcgccagcgttttttatttgaactt
gcagaggcggaagtgtgtcaacacttcaatcgattgcagccggcgctgcgtttactgcag
ggcttcggttgccggctggcggtgaatcaggcgggcctgacggtggttagcaccgcctat
atcaccctggcaggcgttgagctgataaagctccacccgagcctggtgcgcaatatcgat
cgtcgtacggaaaatcagctgtttgtgaagagcctgcttgaggtgtgcagaatgacgccg
acgcagattttcgccgccggcgtccgcacgcgcgacgagtggcaaacgctttcggcactg
ggcgttgccggcggtcagggggactttttttccacctcgcagctggtgaacagcaatgtg
aaaaaatattcccaaagagttcgggtttaa
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