Mixta gaviniae: C2E15_05690
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Entry
C2E15_05690 CDS
T05418
Name
(GenBank) exonuclease subunit SbcC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
pgz
Mixta gaviniae
Brite
KEGG Orthology (KO) [BR:
pgz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pgz03400
]
C2E15_05690
DNA repair and recombination proteins [BR:
pgz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
C2E15_05690
Archaeal homologous recombinant proteins
C2E15_05690
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcC_Walker_B
SMC_N
AAA_29
ABC_tran
AAA_21
cobW
nSTAND3
NTPase_1
ABC_ATPase
AAA_15
AAA_22
GTP_EFTU
Seadorna_VP6
Motif
Other DBs
NCBI-ProteinID:
AUX92620
UniProt:
A0A2L0IDM3
LinkDB
All DBs
Position
complement(1239304..1242981)
Genome browser
AA seq
1225 aa
AA seq
DB search
MKILSLRFKNINSLKGEWKIDFTREPFASSGLFAITGPTGAGKTTLLDAICLALYHETSR
LGKISQNQNELISRDTAECLAEVEFEVKGEAWRAFWSQNRARGAVDGNLQAPRVELARCA
DNVIVADKVKDKLEMIAQLTGLDFARFTKSMMLSQGQFAAFLNADANDRAELLEELTGTE
IYGQLSARIYEQHKQARIELEQLRARAAGMALLEPAARQELDQALNALAQQEQELQKQLA
LTQQQQQWLSQQQRLTQETEQAAEDQRQAESDWQQAEPARQQLARAEPAEKLRPLWQQRN
QLQQDLRQLAQQTQQLTAALQHESEQLLTLQQAQEKAALENQQLNDEWRQQETAINEQVI
PLDHQIASLQLQLTQQQQALADSQHTQQQREQRRGQLSDERQTLLARQQQEQQWRHDHAG
VAHWGERLGGWRERFQQQQQLRQNLAAMQEKQRQQQQLQDEQQQLLSRLTAESAPLESEQ
ARARQHAVRAEQALTALEQQQPESALRRQLEQLQQQRPLRQKLAVCFSTLRPLSQRHAQQ
QQELLALEEQILQQTQQLEQRRQAWKEKHQHRVDLQARLELEQRIVSLEQERARLVAGEP
CPLCGATEHPAVAHYQTLTLNENQQRLESVRQQEEQLRIEGVTCGEQLKALQSQQQRLQQ
QQQALNADLTRQQDEWQTLLAAAGITPAPQEESGPALWIEQQEQRESQLQAQLQQRESAA
RLYQQAKEALTASQQRWQQQHQARQLAEQQLGYLQQQRQETEQQRQQLSQQLEQLSEALT
QELAQHQLTLPDPQGQQAWLDARQETWRRWQKSDQLLADIAARLAACDIALRGIEEELTQ
LAQQRERAEQLAQAQQQQLGELRQQRHQLLGNSAVAEVRQQWQQRLAEADTLLREQQQRR
QQAQDRVNNLTGQHNSLAQQQEAALKRYETCCAQFIAALKQSDFSDEEAFRTALLDEQQA
MQLRTRCQQREARRQQANAVAQQAQTRLAQHLAGRPADLHAALPELEAQLETQQQQLRDL
VRQQGQLRQQLESDDAQRQQQQTLLQRIEENAQQTEDWGYLNQLIGSSSGDKFRRFAQGL
TLDHLVWLANQQLNRLHGRYLLQRKSADTLELQVMDTWQADAQRDTRTLSGGESFLVSLA
LALALSDLVSHKTRIESLFLDEGFGTLDADTLDTALDALDALNASGKTIGVISHVEAMKE
RIPVQIKVRKVNGLGYSRLDRLFSV
NT seq
3678 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattctctccctgcgctttaaaaacatcaactcgctgaaaggcgaatggaaaatc
gactttacccgcgaacctttcgccagcagcggcctgttcgccattaccggccctaccggc
gccggcaaaaccaccctgcttgacgccatctgcctggcgctctatcacgaaacttcgcgg
ctgggcaaaatctcgcaaaaccagaacgagctgatcagccgtgacaccgccgaatgcctg
gccgaggtggagttcgaggtcaaaggcgaagcctggcgcgccttctggagccagaaccgg
gcgcgcggcgcggtggacggcaacctgcaggcgccgcgcgttgagctggcgcgctgcgcg
gacaacgtcatcgtcgctgacaaggtaaaagataagctggagatgatcgcccagctcacc
ggcctcgatttcgcccgcttcaccaaatcgatgatgttgtcgcaggggcagttcgccgct
tttcttaatgccgacgccaacgatcgcgccgagctgctggaggagctgaccggcaccgag
atctacggccagctttccgcgcgcatctatgaacagcataagcaggcgcgcatcgaactg
gagcagttgcgggcgcgggcagcgggcatggcgctgctggaaccggcggcgcgtcaggag
ctggatcaggccctgaacgcgctggcgcagcaggagcaggaactacaaaaacagttagcg
cttactcaacagcagcagcagtggctcagtcagcagcagcggctcacccaggaaacggaa
caggccgccgaagatcaacgccaggcggaaagcgactggcagcaggcggaaccggcgcgt
cagcagctggcacgggcggagccggcggaaaagctgcgcccgctctggcagcagcgcaac
cagctgcaacaggatctgcgccagctggcgcagcaaacgcagcagctgaccgccgcgctt
cagcacgaaagtgagcaattacttacgttgcaacaggcgcaggaaaaagcggctctggag
aatcaacagctaaacgatgagtggcgccagcaggagaccgccatcaatgagcaggtgatc
ccgctcgaccatcagatcgcaagtctgcagctgcagttgacgcagcagcagcaggctctg
gcggatagccagcatacgcagcagcagcgcgaacagcgtcgggggcagctcagcgacgaa
cggcaaacgctgcttgcccggcagcagcaggagcagcagtggcgccacgatcacgcgggc
gtggcgcactggggcgagcggctgggcggctggcgcgagcgttttcagcagcagcaacag
ctgcggcaaaacctggcggcgatgcaggaaaaacagcggcagcagcaacagctgcaggat
gaacagcagcagctgctgtcgcgcctcactgcggaatccgcaccgctggaaagcgaacag
gcgcgcgcacgccagcacgccgtgcgcgctgagcaagcacttactgcattagagcagcag
cagccggaaagcgcgctacgccgtcaactggagcagctacagcagcagcggccgctgcgg
caaaagctggcggtctgcttctcaaccctgcgtccgctcagccaacgccatgcgcaacag
cagcaggagctgctggcgctggaggaacagatcctgcagcagacgcagcagctggagcag
cgacgccaggcatggaaagagaagcatcagcaccgcgtcgatctgcaggcgcgtctggag
ctggagcagcgcatcgtcagcctggagcaggagcgcgcgcgcctggtcgccggcgagccc
tgtccgctgtgcggcgctactgagcatccggcggtagcgcactaccaaaccctgacgctg
aacgaaaaccagcagcggctggagagcgtacgccaacaggaagagcagctgcgcatcgaa
ggcgtgacctgtggcgaacagctgaaggcgctacagagccagcagcagcggcttcagcag
cagcagcaggcgctgaacgccgatctgacgcgccagcaggatgagtggcagacgctgctg
gccgccgccggaataacgccggcgccgcaagaggagagcgggcccgccctctggattgag
cagcaggagcagcgggaaagccagcttcaggcgcagctacagcagcgcgaaagcgccgcg
cgcctttaccagcaggcaaaagaggcgctgaccgccagccagcagcgctggcagcagcag
catcaggcgcggcagctggcggagcagcagttgggctatctgcaacagcagcgccaggag
acggaacagcagcggcagcagctgagccagcagctggagcagctgagcgaggcgctgacg
caggagctggcgcagcatcagctgacgctgccggatccgcaggggcagcaggcgtggctc
gacgcgcgccaggagacgtggcggcgctggcagaaaagcgaccagctgctggcggatatc
gccgcgcgccttgctgcctgcgatatcgcgctgcgcggcattgaagaagagctgacccag
ctggcgcagcagcgcgagcgggcggaacagctggcgcaggcgcagcagcagcagctcggc
gagctgcgtcaacagcgtcatcagctgctcggcaatagcgcggtggcagaagtacgccag
cagtggcaacagcggctggcagaggccgacacgctgttgcgcgagcagcagcagcgtcgg
caacaggcgcaggatcgggtcaataacctgaccggacagcataattcgctggcgcaacag
caggaggcggcgctgaaacgctatgaaacctgctgcgcgcagtttatcgccgcgctgaag
cagagcgatttcagtgatgaagaggcatttcgcaccgcgctgctggatgagcagcaggcc
atgcagctgcgcacccgctgtcagcagcgggaggcgcgtcgccagcaggctaacgcggtg
gcacagcaggcgcagacgcgtctggcgcagcaccttgccggccgcccggccgatctccac
gccgcgctaccggagctggaagcgcagctggagacgcagcagcaacagctgcgcgatctg
gttcgccagcaggggcagctgcgccagcagctggagagcgacgacgcgcagcgccagcag
caacagacgctgctgcagcgcattgaagagaatgcccagcagaccgaagactggggctac
ctcaatcagctgatcggctccagcagcggcgataaattccgccgcttcgcccaggggctg
acgctcgatcacctggtctggctggcgaaccagcagctaaaccgtctgcacgggcgctat
ctgctgcagcggaaatcggccgatacgctggagttgcaggtcatggacacctggcaggcc
gacgcgcagcgcgatacccgcaccctgtcgggcggcgaaagttttctggtcagccttgcg
ctggcgctggcgctctccgacctggtcagccataaaacccgcatcgaatcgctgtttctc
gatgagggcttcggcacgctggatgcggatacgcttgataccgcgctcgacgcgctggat
gcgcttaacgccagcggcaaaaccattggggtgatcagccacgtcgaggcgatgaaagag
cgtattccggtgcagatcaaagtcaggaaggttaacggcctcggctacagccggctggac
cggctattttcagtctga
DBGET
integrated database retrieval system
