Mixta gaviniae: C2E15_11195
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Entry
C2E15_11195 CDS
T05418
Name
(GenBank) exoribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
pgz
Mixta gaviniae
Brite
KEGG Orthology (KO) [BR:
pgz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pgz03016
]
C2E15_11195
Enzymes [BR:
pgz01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
C2E15_11195
Transfer RNA biogenesis [BR:
pgz03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
C2E15_11195
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Gene cluster
GFIT
Motif
Pfam:
RNB
OB_RNB
S1
CSD2
S1CSD-TOTE-2
PilZ
ODP
Motif
Other DBs
NCBI-ProteinID:
AUX93588
UniProt:
A0A2L0IG68
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All DBs
Position
2413160..2415097
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AA seq
645 aa
AA seq
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MFQDNPLLAQLKEKLHAQTPRVEGVVKGTEKGFGFLEVDAQKSYFIPPPQMKKVMAGDRV
IAAVQTDKDREIAEPETLVEPFLTRFVGRVQKKDDRLSIVPDHPLIKDNIPCRPIRSLQH
DFQAGDWAVAEMRRHPLKGDRGFYAELTEFITTGDDHLAPWWVTLSRHNLEREAPAVEFS
DMLDENLTREDLTAFDFVTIDSASTEDMDDALYVEALADNALRLTIAIADPTAYVPAGSK
LDAMAAERAFTNYLPGFNIPMLPRELSDNVCSLRPDERRPALACRVTVAQDGALSDVQFF
AAWVESKAKLAYDDVSDWLESNGESAWQPQSEAIAQQIRLLHRLCQARVEWRQQHALVFK
DRPDYRFLLGEKGEVLDIVAEPRRIANRIVEESMIAANICAAMVLREKLGFGIYNVHLGF
DLANAEQAAAVLANHGVTADAAAMATLEGFRELRRQLDAQPTQFLDSRIRRFQSFAEIST
EPGPHFGLGLEAYATWTSPIRKYGDMVNHRLLKAIIRGESAQRPTEEVTLKMGERRRLNR
MAERDVGDWLYARFLQKAAGSDTRFSAEIIDVSRGGMRVRLLANGAVAFIPAPFIHAVRD
ELTCSQENGTVQVKGDVVYRVTDVIEVTIAEVRMETRSIVARPAV
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
atgttccaggataacccgctgcttgcgcagctcaaagagaagctccatgcccagacgccg
cgtgtcgaaggggtggtaaaaggcaccgaaaaaggtttcggtttcttagaagtcgatgcg
cagaaaagctactttattccgccgccgcagatgaaaaaagtgatggcgggcgaccgcgtg
atcgctgcggtgcaaactgataaagatcgcgaaatcgccgagccggaaacgctggttgag
ccgttcctgacgcgctttgttggccgggtgcagaaaaaagatgatcgcctctccatcgtt
cccgatcatccgctgatcaaagacaacatcccttgccgtcccattcgcagcctgcagcat
gattttcaggcgggcgactgggccgtggcggaaatgcgtcgccacccgctgaagggcgat
cgcggtttctatgccgaactgaccgaatttatcaccaccggcgacgatcatctggcgccg
tggtgggtgacactgtcacgccataatctggagcgtgaagcgccggcggtggaattcagc
gacatgctggatgagaacctgacgcgtgaagatctcaccgcgttcgatttcgtcaccatc
gacagcgccagcaccgaagatatggatgatgcgctctatgtcgaagcgctggcggacaac
gcgctgcgtctgaccatcgccatcgccgatccgaccgcttacgtgccggccggcagcaag
ctggacgcgatggccgccgaacgcgccttcaccaactatctgccgggtttcaatatcccg
atgctgccgcgtgagctttctgacaacgtctgctcgctgcgtcctgacgaacgccgcccg
gcgctcgcctgccgcgttaccgtggcgcaggacggcgcgctctccgacgtacagttcttc
gccgcctgggttgaatcgaaagccaagctggcctatgacgacgtctccgactggctggaa
agcaatggcgagagcgcctggcagccgcagagcgaggcgatcgcccagcagatccgttta
ctgcaccgtctctgccaggcgcgtgtcgagtggcgccagcagcatgcgttggtgtttaaa
gatcgtcctgactaccgcttcctgctgggcgagaaaggcgaagtgctggatatcgttgcc
gagccgcgccgtatcgcgaaccgtatcgtggaagagtcgatgatcgccgctaacatctgc
gcggcgatggtgctgcgcgagaagctcggcttcggcatctataacgtccacctgggcttc
gatctcgccaacgctgagcaggctgcggccgtgctggccaatcacggcgttaccgccgac
gctgcggcgatggcgacgctggaaggcttccgcgagctgcgtcgtcagctggacgcacag
ccgacccagttcctcgatagccgtatccgccgcttccagtcgtttgctgagatcagcacc
gagccaggcccgcattttggcctcggtcttgaagcatacgcgacctggacctcgccgatc
cgtaaatatggcgatatggtcaaccatcgtctgttgaaagcgattattcgcggcgaaagc
gcccagcgtccgaccgaagaggttacgctgaaaatgggcgaacgccgtcgtctgaaccgt
atggcagagcgtgatgtgggtgactggctctatgcgcgtttcctgcagaaagcggcaggc
agcgatacccgcttcagcgccgagatcatcgacgtttcccgcggcggcatgcgcgtgcgc
ctgctggctaacggcgccgtagcctttattccggcgccgtttatccacgccgtgcgcgac
gagctgacctgcagccaggaaaacggtacggtgcaggtgaaaggcgacgtggtgtatcgc
gttaccgacgtcattgaggtaaccatcgccgaagtgcgtatggaaacccgcagcatcgtg
gcgcgtccggccgtctga
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