Mixta gaviniae: C2E15_11805
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Entry
C2E15_11805 CDS
T05418
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
pgz
Mixta gaviniae
Brite
KEGG Orthology (KO) [BR:
pgz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pgz03016
]
C2E15_11805
Enzymes [BR:
pgz01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
C2E15_11805
Transfer RNA biogenesis [BR:
pgz03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
C2E15_11805
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNAseD_HRDC_C
HRDC
Motif
Other DBs
NCBI-ProteinID:
AUX95460
UniProt:
A0A1X1DNU1
LinkDB
All DBs
Position
complement(2532904..2534031)
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AA seq
375 aa
AA seq
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MNYTYITTNEALQACCEAARQHRAIALDTEFVRTRTYYPQLGLLQIYDGEQISLVDPLTI
TAWQPLIALLSDSSITKFLHAGSEDLEVFLHSFGVLPTPLIDTQILAAFSGRPLSMGFAA
MVENFTGEVLDKSESRTDWLARPLSARQCEYAAADVFWLLPIAHTLMDETAAAGQLEAAR
SECLLLCQRRTDILQPEEAYREIGNASLLRPRQLAALQRLAAWRLKLAREKNMAVNFVVR
EENLWKVARYLPGTLGELDHLGLSGHEIRFHGKTLLDMVSAANALPEEALPLALMNINEH
PLYKKAFKALKAVVQAVSERSGLSTELLASRRQINQLLSWHWQIKPRERLPELVSGWRGE
LMEQDIKQVLADYPQ
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
ttgaattacacctacatcaccaccaacgaagcgctgcaagcctgctgtgaggcggcgcgc
cagcatcgcgctatcgcgctcgatactgaatttgtccgtacccgcacctactacccgcag
ctgggcctgctgcaaatttacgatggcgagcagatctctctggtcgatccgttgaccatt
accgcctggcagccgctgatcgcactgctgagcgacagcagcatcaccaaattcctgcac
gccggcagcgaagatcttgaggtctttctgcatagtttcggcgtgctgccgacgccattg
atcgatacccagatcctggcagcgttcagcggccgtccgctgtcgatgggctttgcggcg
atggtggagaactttaccggcgaagtgctggataaaagcgaatcgcgcaccgattggctg
gcgcgtccgctctccgcacggcaatgcgaatatgccgcggcggatgtcttctggctactg
ccgatcgcccatacgctgatggacgaaacggccgccgccggccagctggaggcagcgcgc
agcgaatgtttgctgctgtgccagcgccgcaccgatattctgcagccggaagaggcgtat
cgcgaaattggcaacgcttcgctgctgcgtccgcgtcaactggcggcgctgcagcgcctg
gccgcctggcgtctgaagctggcgcgcgagaagaatatggcggtcaacttcgtggtgcgt
gaggagaacctgtggaaggtggcacgctacctgccgggcacgctgggtgagctggatcac
ttagggctgagcggccatgaaattcgtttccacggcaaaacgctgctggatatggtaagc
gcggctaatgccctgccggaagaggcgctgccactggcgctgatgaatatcaatgagcat
ccgctgtataaaaaagcgtttaaggcgctgaaggcggtggtgcaggcggtcagcgagcgc
agcgggcttagcaccgaactgctggcgtcacgtcgccaaatcaatcagctgttaagctgg
cactggcagatcaaaccgcgcgagcggctgcctgaactggtaagcggctggcgtggcgag
ctaatggagcaggatatcaagcaggtgctggctgactatccgcaatag
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