Mixta gaviniae: C2E15_13315
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Entry
C2E15_13315 CDS
T05418
Name
(GenBank) exodeoxyribonuclease I
KO
K01141
exodeoxyribonuclease I [EC:
3.1.11.1
]
Organism
pgz
Mixta gaviniae
Pathway
pgz03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pgz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
C2E15_13315
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pgz03400
]
C2E15_13315
Enzymes [BR:
pgz01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.1 exodeoxyribonuclease I
C2E15_13315
DNA repair and recombination proteins [BR:
pgz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
C2E15_13315
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
C2E15_13315
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
C2E15_13315
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ExoI_SH3
ExoI_C
RNase_T
Motif
Other DBs
NCBI-ProteinID:
AUX93958
UniProt:
A0A1X1DV97
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All DBs
Position
2846173..2847600
Genome browser
AA seq
475 aa
AA seq
DB search
MSDNANQPTFLFHDYETFGKSPALDRPAQFAGIRTDMDFNIIGEPEVFYCQPADDYLPQP
EAVMITGITPQLAQARGVTEAEFARRIHALFTVENTCVVGYNNVRFDDEVTRNIFYRNFY
DPYAWSWQNGNSRWDLLDVMRACYALRPDGINWPENEDGLPSFKLELLTQANGVEHSNAH
DAMSDVYATIAMAKLVKEKQPKLFEFLFRHRTKQKINTLIDIPQMKPLVHISGMFGALKG
NTSWIAPLAWHPENRNALIVCDLAEDISPLLELDADALRERLYTPRQALGDSAPVPIKLV
HSNKCPVLAPANTLRPEDAERLGIDRQRCLDNLALLRQHAEVREKVVAIYAEAEPFTPAD
DVDAQIYNGFFSDADKSAMTIIQKTAPANLPALDLTFNDARIEKLLFRYRARNYPGTLDD
SEQQRWLQHRREVLNGERIEAFLLELESLANLHDGDKEKMTQLKALYDYARQLVS
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgataacgcgaaccagccaaccttcctcttccacgattacgaaaccttcggcaaa
agcccggcgctggatcgcccggcgcagttcgccggcatccgcaccgatatggatttcaat
atcatcggtgaaccggaggttttttactgccagcctgcggatgactatctgccgcagccg
gaggcggtgatgatcaccggcatcacgccgcagctggcgcaggcgcgcggcgtcactgaa
gcggagttcgcccggcgcattcatgccctgttcaccgtcgaaaacacctgcgtggtcggc
tataacaacgtgcgcttcgacgatgaggtgacgcgcaatattttttaccgcaatttctac
gatccctacgcctggagctggcagaacggcaactcgcgctgggatctgctggatgtgatg
cgtgcctgctacgcgctgcgtccggacggtatcaactggccggaaaacgaagacgggctg
ccgagctttaagctggagctgctgacgcaggccaacggcgtggagcatagcaatgcgcac
gacgcgatgtcggacgtttacgccactatcgccatggcgaagctggtgaaagaaaaacag
ccgaagctgttcgagttcctgttccggcaccgcaccaaacagaagatcaatacgctgatc
gatatcccgcagatgaagccgctggtgcatatctccggcatgttcggcgcgctaaaaggc
aacaccagctggatcgccccgctcgcctggcatccggaaaaccgcaacgcgctgattgtc
tgcgacctggcggaagatatcagcccgctgctggagctggatgccgatgcgctgcgcgaa
aggctctatacgccgcgtcaggcgctgggcgatagcgcgcccgtgccaattaagttggtt
cacagcaataaatgtccggtgctggcgcccgccaatacgctgcgtccggaagatgccgaa
cggctgggcatcgatcgtcagcgctgcctcgataatctggcgctgctgcgtcagcacgct
gaggtgcgcgaaaaagtggtggcgatctatgctgaagcggagccgtttacccctgcagac
gatgtcgatgcccagatctataacggcttcttcagcgatgccgataaatcagcgatgacc
attattcagaaaaccgcgcccgccaatctgcccgcgctcgatctcacttttaacgatgcg
cgcattgagaagctgctgttccgctatcgcgcgcgcaactaccccggcacgctggacgac
agcgagcagcagcgctggctgcagcatcgccgcgaggtgttgaacggcgaacgcatcgag
gcgtttctgctggagctggagtcgctggccaacctgcacgatggcgataaagagaagatg
acgcagctgaaagcgctgtatgattacgcgcgtcagctggtctcctga
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