Mixta gaviniae: C2E15_16740
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Entry
C2E15_16740 CDS
T05418
Name
(GenBank) tRNA pseudouridine(13) synthase TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
pgz
Mixta gaviniae
Brite
KEGG Orthology (KO) [BR:
pgz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pgz03016
]
C2E15_16740
Enzymes [BR:
pgz01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
C2E15_16740
Transfer RNA biogenesis [BR:
pgz03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
C2E15_16740
Prokaryotic type
C2E15_16740
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
AUX94552
UniProt:
A0A1X1DY87
LinkDB
All DBs
Position
complement(3571887..3572936)
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AA seq
349 aa
AA seq
DB search
MALPAWQWLHGKPGIQGQLKASPEDFAVIEDLGYEADGEGEHLLVRIRKTGCNTRFVAEA
LAKFAKIHPRDVSFAGMKDRYAVTEQTLCLRLPGKETPDFSVFSLEGCEILQLARHKRKL
RTGALAGNAFKLVLRQISDRAALEARLQQVCAGGAPNYFGQQRFGFQGSNLDQAKRWAAN
EIRVRERNKRSFLLSAARSVLFNQVVSDRLAQQGSLTQAMPGDALQLTGRGSWFVAAEEE
LPQLQPRIENNELRITAPLPGRGEWGSRDAALAFEQQSLADETALMALLERERVEAARRA
MLVIPRDMRWSWCDDATLTLSFWLPAGSFATSIVRELFEQEGNDADIAE
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atggcgcttccagcatggcagtggctgcacggcaagcccggcatccaggggcagcttaaa
gccagtccggaagatttcgccgttatcgaagatctcggctacgaggcggacggtgaaggg
gagcatctgctggtgcgtattcgcaaaaccggctgcaatacccgttttgtcgccgaggcg
ctggccaaattcgccaaaatccatccgcgcgatgtcagcttcgccgggatgaaagatcgc
tatgcggtgacggagcagaccctctgcctgcgtctgccgggcaaagagacccccgatttt
tccgtcttttcgctggaagggtgcgagatcctgcagctggcgcgccataaacgcaaactg
cgcaccggcgcgctggcgggcaacgcctttaagctggtgttgcgccagatcagcgatcgc
gccgcgctggaagcgcgtctgcagcaggtttgcgccggcggcgcgccgaactatttcggc
cagcagcgttttggctttcagggcagcaatctcgatcaggcgaagcgctgggccgctaat
gaaattcgcgtgcgcgaacgtaataagcgcagcttcctgctatccgcagcgcgcagcgtg
ctgtttaatcaggtggtcagcgaccggctggcgcagcagggcagcctgacgcaggcgatg
ccaggcgatgcgctgcagcttaccggacgtggcagctggtttgtggcggctgaagaggag
ctgccgcagctgcagccgcgtatcgagaataatgagctgcgtatcaccgcgccactgcct
ggccgcggcgagtggggtagccgcgatgccgcgctggcatttgaacagcagagcctggct
gacgaaacggcgctgatggcgctgcttgagcgcgagcgcgtcgaagcggcgcgccgggct
atgctggttatcccgcgcgatatgcgctggagctggtgcgacgacgccacgctaacgctc
agtttctggctgcctgccggcagcttcgccaccagcatagtcagggaacttttcgaacag
gaaggtaacgatgcggatattgctgagtaa
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