Mixta gaviniae: C2E15_20375
Help
Entry
C2E15_20375 CDS
T05418
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
pgz
Mixta gaviniae
Pathway
pgz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pgz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
C2E15_20375 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pgz03021
]
C2E15_20375 (rho)
03019 Messenger RNA biogenesis [BR:
pgz03019
]
C2E15_20375 (rho)
Transcription machinery [BR:
pgz03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
C2E15_20375 (rho)
Messenger RNA biogenesis [BR:
pgz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
C2E15_20375 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
NACHT
OB_RNB
S1CSD-TOTE-2
AAA_22
AAA_25
AAA
FtsK_SpoIIIE
Motif
Other DBs
NCBI-ProteinID:
AUX95178
UniProt:
A0A2L0IKU1
LinkDB
All DBs
Position
complement(4354089..4355348)
Genome browser
AA seq
419 aa
AA seq
DB search
MNLTELKNTPVSELITLGENMGLENLARMRKQDIIFAILKQHAKSGEDIFGDGVLEILQD
GFGFLRSADSSYLAGPDDIYVSPSQIRRFNLRTGDTISGKIRPPKEGERYFALLKVNEVN
YDKPENARSKILFENLTPLHANSRLRMERGNGSTEDLTARVLDLASPIGRGQRGLIVAPP
KAGKTMLLQNIAQSIAYNHPDCVLMVLLIDERPEEVTEMQRLVKGEVVASTFDEPASRHV
QVAEMVIEKAKRLVEHKKDVIILLDSITRLARAYNTVVPASGKVLTGGVDANALHRPKRF
FGAARNVEEGGSLTIIATALVDTGSKMDEVIYEEFKGTGNMELHLARKIAEKRVFPAIDY
NRSGTRKEELLTSQEELQKMWILRKIIHPMGEIDAMEFLINKLAMTKTNDEFFDMMKRS
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttaccgaactaaaaaatacgccggtttcagagctgattactctcggcgagaac
atggggctggaaaacctggcgcgcatgcgcaaacaggacatcattttcgctatcctcaaa
caacacgccaagagcggtgaggatatcttcggtgatggtgtgctggagatactgcaggat
ggatttggtttcctccgctccgcagacagctcctaccttgccggccccgatgacatctac
gtttcccccagccaaattcgccgcttcaaccttcgcactggtgacaccatttccggcaag
atccgtccgccgaaagagggtgagcgttatttcgcgctgctgaaggttaatgaagtcaac
tatgacaagccggaaaatgcgcgcagtaagattctgtttgaaaaccttaccccgctgcac
gccaattcacgtctgcgcatggagcgcggcaacggctcaacggaagatctgaccgctcgc
gtactggatctggcttcgccgatcggtcgcggccagcgcggcctgatcgtggcgccgccg
aaagcgggtaaaaccatgctgctgcagaacatcgcgcagagcatcgcctacaaccatccg
gactgtgtgctgatggtgctgttgatcgacgaacgtccggaagaagtgaccgagatgcag
cgtctggtcaaaggcgaagtggttgcgtctacctttgatgaacccgcctctcgccacgta
caggttgccgaaatggtgatcgaaaaggcgaagcgtctggttgagcataaaaaggatgtg
atcatcctgctcgactccatcacccgtctggcgcgcgcttacaacaccgtggtgccggcg
tccggtaaagtcctgaccggtggtgtggacgcaaacgccctgcatcgtccgaagcgcttc
ttcggtgcggcgcgtaacgtagaagagggcggcagcctgaccatcatcgcgaccgcgctg
gttgataccggctcgaagatggatgaggttatctacgaagagtttaaaggtaccggcaac
atggagctgcatctggcgcgtaaaatcgctgaaaaacgcgtcttcccggctatcgactac
aaccgttccggtacgcgtaaagaagagctgctcacttctcaggaagagctgcagaaaatg
tggatcctgcgcaaaatcatccatccgatgggtgaaatcgacgcgatggaattcctcatt
aataagttggcaatgaccaagaccaacgatgaattcttcgacatgatgaagcgttcataa
DBGET
integrated database retrieval system
