Mixta gaviniae: C2E15_20850
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Entry
C2E15_20850 CDS
T05418
Name
(GenBank) DNA-formamidopyrimidine glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
pgz
Mixta gaviniae
Pathway
pgz03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pgz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
C2E15_20850
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pgz03400
]
C2E15_20850
Enzymes [BR:
pgz01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
C2E15_20850
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
C2E15_20850
DNA repair and recombination proteins [BR:
pgz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
C2E15_20850
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
zf-dskA_traR
Motif
Other DBs
NCBI-ProteinID:
AUX95260
UniProt:
A0A1X1E176
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Position
complement(4453964..4454773)
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AA seq
269 aa
AA seq
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MPELPEVETSRRGIEPHLVGETILHAVVRNPRLRWPVSQEIHALSDQPVLSVQRRAKYLL
LELPHGWIIIHLGMSGSLRVLPEEIPAAKHDHVDLVMSNGKVLRYTDPRRFGAWLWSSDL
QGSNVLAHLGPEPLSEQFSTDYLFEKSRGKRTAVKPWLMDNKLVVGVGNIYASESLFAAG
ILPDRPAMSLSREEAALLVKTIKAVLLRSIEQGGTTLRDFLQSDGKPGYFAQQLQVYGRA
GEPCRVCGTPIDSAKHGQRSTFFCRNCQK
NT seq
810 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaattacctgaggtagaaaccagccgtcgcggcattgaaccgcatctggtgggg
gagacaattctgcacgcggtagtgcgcaatccgcgcctgcgctggcccgtctcgcaggag
atccacgccctgagcgatcagccggtgctgagcgtccagcggcgcgcgaaatatctgctg
ctggagctgccgcatgggtggatcatcattcacctgggcatgtcaggcagcctgcgcgtg
ctgccggaagagatcccggcggcgaagcacgatcatgtcgatctggtgatgagtaacggc
aaagtgctgcgctataccgatccgcgtcgtttcggcgcctggctgtggagcagcgacctg
cagggcagcaatgtgctggcacacctcgggccggaaccgctcagcgagcagttcagcacg
gactatctgtttgaaaaatcacgcggcaagcgcacggccgtcaagccctggctgatggat
aacaagctggtggtcggcgtgggcaacatctacgccagtgaatcgcttttcgccgccggg
atcctgcccgatcgtccggcgatgtcgctgagccgtgaagaggcggcgctgctggtgaaa
accattaaggcggtactgctacgttctattgagcagggcggcacgacgctgcgcgatttt
ctgcagagcgacggcaaaccgggctattttgctcagcagctgcaggtatatggccgtgcc
ggagaaccctgtcgcgtttgcggcacgccgatcgacagtgcgaagcatgggcagcgcagc
acctttttctgccgtaactgccagaaatag
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