Pseudoalteromonas translucida TAC125: PSHAa0078
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Entry
PSHAa0078 CDS
T00282
Name
(GenBank) conserved protein of unknown function
KO
K09136
ribosomal protein S12 methylthiotransferase accessory factor
Organism
pha
Pseudoalteromonas translucida TAC125
Brite
KEGG Orthology (KO) [BR:
pha00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pha03009
]
PSHAa0078
Ribosome biogenesis [BR:
pha03009
]
Prokaryotic type
ribosomal protein modification factors
PSHAa0078
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Ortholog
Paralog
GFIT
Motif
Pfam:
YcaO
YcaO_C
EAL
Motif
Other DBs
NCBI-ProteinID:
CAI85187
UniProt:
Q3IF84
LinkDB
All DBs
Position
I:complement(81911..83671)
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AA seq
586 aa
AA seq
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MTDKTFIKGKDRDLESSISTMQNKLKALNINIEEALWLNPVANCYSVHIRDQDCGVMFTN
GKGANDKASLASALGEYFERLSCNYFFADFYLGEEFAHAEFTHYPTEKWFTVTNDEVPEG
IMDESLWDYFDPERELNASHLFDFNSGNVKRGICTVPYTRQSDNQDVYIPVNVIGNIFVS
NGMSAGNTKFEARVQGLSEVFERAIKSRIITEGLCLPIVPEEVVKLYPKIYEACEELRSH
GFHLRIADASLGGKYPVMSVTLIHPADGSVFASFGAHPSFEVALERTVTELLQGRRLDQL
DVFQPATFDNDEVASPENTELHFIDSSGLISHDFFRAKADFDFVHWDFSGTTEQEYNFCT
DLIHSMGHDIYIMDYTHLNVYACRILVPGMSDIYPVDELIWRNNNEGAKFRETFLSLDQY
DVEQWMEIYDSLEEAGHSDIIRAAEFIGLVTDPDTSWDTLRIGELKAHLCLAAGNEEAID
WVDWILHTGQVNEDAMRHFRCLKAILEIKYDDEREYADYQDALGLMFGTANVTLAIEIAE
GRKLFNGLTFPGLSLTGFTKHAALLDGYRKLHVAKQQHWAREVSDS
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atgactgataaaacatttataaaaggtaaagaccgcgatttagaatcgtcgatctctact
atgcaaaataagctaaaagcccttaatattaatattgaggaagcgttatggcttaaccct
gtagctaactgttattcggtacatattcgtgaccaagactgtggcgtaatgtttaccaat
ggtaaaggcgcaaacgacaaagcatcgttagcttcggcattaggcgaatactttgaacgc
ttaagctgtaactacttttttgctgacttttatttaggtgaagaatttgcccatgcagag
tttacccattacccaaccgaaaagtggtttacagtaacaaacgatgaagtgcctgagggc
attatggatgaaagcttatgggactactttgacccagagcgcgaacttaatgcatcgcac
cttttcgattttaactctggtaatgttaagcgtggcatttgtactgtgccatacacccgc
caaagcgataaccaagatgtgtatattccggttaacgttattggtaatatttttgtatct
aacggtatgagtgccggcaatactaaatttgaagcacgcgtacaaggcttatccgaagta
tttgaacgcgctataaaaagccgcattattactgagggcttgtgtctgcctatcgtgcct
gaagaagtcgttaagctgtatcctaaaatttatgaagcgtgtgaagagttacgcagccat
ggttttcatttacgtattgccgatgcctctctaggcggtaaatacccagtaatgagcgtt
acccttattcacccagctgatggctctgtatttgcttcttttggtgctcacccatcattt
gaagtggcacttgagcgtaccgtaacagaactattacaaggtcgtcgtttagatcaactt
gatgtgtttcaacctgctacttttgataatgatgaagttgcctctccagaaaacactgaa
ctgcactttattgattctagcggcttaatttctcatgactttttccgcgcaaaagccgac
tttgactttgtgcattgggactttagcggcacaactgagcaagaatataacttttgtacc
gacttaatccatagcatggggcatgatatttacatcatggattacactcacttaaacgta
tatgcatgtcgtattttagtccctggtatgtcagacatttacccagttgatgaactaatt
tggcgtaacaacaacgaaggcgctaagttccgcgaaacatttttatcacttgatcagtac
gacgttgagcaatggatggaaatttatgactcactagaggaagcgggccatagcgatatc
attcgcgctgccgagtttattggtttagtaaccgaccctgatacatcttgggatacgctg
cgtattggtgaactaaaagcgcacctttgcctagccgcaggtaacgaagaagccattgat
tgggttgactggatattacataccgggcaagtaaacgaagatgcaatgcgtcactttcgc
tgtttaaaagctattttagaaataaaatacgatgacgaacgcgaatatgcagactatcaa
gatgcattaggcttaatgtttggtactgccaatgtaacgctcgcaattgaaatagccgaa
ggccgtaaattatttaacggtttaaccttcccaggcttatcgcttactggctttacaaag
catgctgcattactcgatggttatcgcaagctccatgtagctaaacagcagcattgggca
cgcgaggttagcgactcgtaa
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