Pseudoalteromonas translucida TAC125: PSHAa0090
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Entry
PSHAa0090 CDS
T00282
Symbol
xerC
Name
(GenBank) site-specific recombinase
KO
K03733
integrase/recombinase XerC
Organism
pha
Pseudoalteromonas translucida TAC125
Brite
KEGG Orthology (KO) [BR:
pha00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pha03036
]
PSHAa0090 (xerC)
Chromosome and associated proteins [BR:
pha03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
PSHAa0090 (xerC)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Phage_integrase
Phage_int_SAM_1
Phage_int_SAM_4
MrpR_C_cat
DUF3435
Motif
Other DBs
NCBI-ProteinID:
CAI85199
UniProt:
Q3IDS2
LinkDB
All DBs
Position
I:complement(93298..94245)
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AA seq
315 aa
AA seq
DB search
MSDNPAPNISDLSDNWRTPITLFSDYLKFERQYSAHTVNQYVSQLGFAALYFSKLCDDWF
SVQGEHIRRYSMALRSKQLSGRTISLKLSCIRSLYKFLKAKNIAKQAHYHNPAVGIKGPK
FAKPLPKNLDVDQMARLLEIPDDEPLAIRDKAMMELMYSSGLRISELVGANLQDISAANG
EILVRGKGNKERLIPVGSKALNALKKWLIIRPQFANPDEVAVFLSSKKNRISVRQVRLRM
QEWGIKQGISSQVHPHKLRHSFASHILESSGDLRAVQELLGHSSLSATQVYTHLDFQHLA
KVYDNTHPRAKKRTD
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgagtgacaaccctgcgccaaatatcagcgacttaagcgataactggcgcacgcctatt
actttatttagcgactatttaaagtttgaaaggcaatactcagcgcacactgttaaccaa
tatgtcagccagcttggctttgcagcgctttactttagtaagctctgcgacgactggttt
agtgtacagggtgagcatattcgccgttacagcatggcactgcgctcaaaacaattaagt
ggccgcactattagtttaaagctcagttgtattcgcagtttatataaattcttaaaagct
aaaaatattgctaaacaagcgcattaccataacccggcggtaggcataaaagggcctaag
tttgctaagcctttgcctaaaaatctcgatgtagatcaaatggcacgcttgctcgaaata
cccgacgacgaacctctggccattagagacaaagccatgatggagcttatgtactcatca
ggtttacgtattagcgagttagttggtgctaacctacaagatataagcgccgcaaatggt
gaaatattagtacgcggtaaaggcaataaagaacgcttaattccggtaggcagtaaagcg
ctaaacgcgctaaaaaaatggctcataatacgccctcaatttgcaaaccctgacgaagtg
gcggtatttttaagtagcaaaaaaaatcgcatttcggtacgccaagtacgtttaagaatg
caagaatggggcatcaagcaaggcattagctcgcaagtgcatccgcacaaattgcgccac
tcgtttgcttcgcatattttagagtcatctggcgatttacgcgcggtacaagaactgctc
gggcacagtagtttgtcggccactcaagtgtatactcatttagattttcagcatttagcc
aaggtgtacgacaacacgcacccaagggcaaaaaagcgaactgattag
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