| Entry |
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| Symbol |
rpoB
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| Name |
(GenBank) DNA-directed RNA polymerase beta chain (RNAP beta subunit) (Transcriptase beta chain) (RNA polymerase beta subunit)
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| KO |
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| Organism |
pha Pseudoalteromonas translucida TAC125
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:pha00001]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
PSHAa0222 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:pha03021]
PSHAa0222 (rpoB)
03400 DNA repair and recombination proteins [BR:pha03400]
PSHAa0222 (rpoB)
Enzymes [BR:pha01000]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
PSHAa0222 (rpoB)
Transcription machinery [BR:pha03021]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
PSHAa0222 (rpoB)
DNA repair and recombination proteins [BR:pha03400]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
PSHAa0222 (rpoB)
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
I:228338..232363
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| AA seq |
1341 aa
MAYSYSEKKRIRKDFGKRPQVLDIPFLLSTQLKSFKKFLVPDADGDHGLEAAFRSVFPIK
SYSGNSELQYVSYRIGEPVFDVKECQIRGVTYSAPLRVKLRLVVMDKEAPGTVKDIKEQE
VYMGEIPLMTDTGTFVINGTERVIVSQLHRSPGVFFDNDRGKTHSSGKVLYNARVIPYRG
SWLDFEFDAKDNLYVRIDRRRKLPASIILRALEYSSEDILGIFFDNTTFEVTDGKVLMEL
VPSRLRGETAAFDIKSEDGEVFVESGRRVTARHIKNIEKKGIKQLEVPHEYIIGRVLAKN
YVDESTGEVVANANDELTLELMAELVKAGHTKIDTLYINEVDSGAYMSNTLNIDSSSSRL
EALVEIYRMMRPGEPPTKDAAEALFQNLFFSEERYDLSTVGRMKFNSRVGYDTDTGPGTL
SKEDIVSVMKVLIAIRNGVGDVDDIDHLGNRRIRSVGEMAENQFRVGLVRVERAVRERLS
LGDLDAIMPQDLINAKPISAAVKEFFGSSQLSQFMDQNNPLSEVTHKRRISALGPGGLTR
ERAGFEVRDVHVTHYGRVCPIETPEGPNIGLINSLSTYARTNDYGFLETPYRKVVDGVVT
DEVDYLSAIEEGQFVIAQANSNLTETNEFVDELIPCRHKGESTFMGRMDQQYMDVSPQQV
ISVAAALIPFLEHDDANRALMGSNMQRQAVPTLKADKPLVGTGIELTLAKDSGVTIVAKR
GGEVMYCDASRIVVNVHEEERVPGEAGIDIYNLTKYTRSNQNTCINQKPTCMVGEPVTRG
DVLADGPSTDLGDLALGQNLRVAFMPWNGYNFEDSILLSERVVEEDRLTTIHIQELQCIA
RDTKLGSEEITADIPNVGESALGKLDESGVVYIGAEVKSGDILVGKVTPKGETQLTPEEK
LLRAIFGEKASDVKDSSLRVPNSVTGTVIDVQVFTRDGVEKDKRALEVEEMQLRDAKKDF
NEEFRILEAGVLDRARKLLIAAGFDEDKLALLNAEKLLTQSLAEEDKQAELEQLAAQYDE
LKAEYDKKFENKRRKITQGDDLAPGVLKIVKVYLAVKRCIQPGDKMAGRHGNKGVISTIV
PVEDMPYDDKGRTVDIVLNPLGVPSRMNIGQILETHMGLAARGIGERIEEMMKEQRELHE
LRAFIKQAYEIGESRQVVDIDSFTDDEIRRLAENLKGGLPIATPAFDGAKENEIKDMLEL
AGYPRSGQVTLYDGRTGDQFERQVTVGYMYMLKLNHLVDDKMHARSTGSYSLVTQQPLGG
KAQFGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDVNGRTKMYKNIVDGNHKMEPGMPE
SFNVLLKEIRSLGINIELEEN |
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| NT seq |
4026 nt +upstreamnt +downstreamnt
atggcttactcttattctgaaaagaaacgtatccgtaaggattttggtaaacgtccacaa
gttttggatatacctttcttactatctacacagttaaaatcgtttaaaaaattcttagtg
cctgacgctgatggcgatcatggtttggaagcagcgttccgttctgtgttcccaattaag
agctactcaggaaattctgagctgcaatacgtaagttatcgtattggcgagccagttttc
gatgtaaaagaatgtcaaattcgcggtgtgacttattctgctccacttcgcgtgaaattg
cgtcttgtagttatggacaaagaagctccaggcacagttaaagacattaaagagcaagaa
gtttacatgggcgaaattccgctcatgaccgataccggtacctttgtaatcaatggtaca
gagcgtgttatcgtttctcagctacaccgtagccctggtgtattctttgataacgaccgc
ggtaaaactcactcatcgggtaaagtgttatataacgcacgtgttatcccatatcgtggt
tcatggttagactttgaatttgatgcaaaagataacttatatgtacgtattgaccgtcgt
cgtaaattaccggcgtctattatcttacgtgcacttgagtactcgagtgaagacattctt
ggtattttcttcgacaacactacgtttgaagtaactgacggtaaagttcttatggaactg
gtaccttcacgtttacgtggtgaaaccgccgcttttgatattaagagcgaagacggtgaa
gtgtttgttgaaagtggtcgtcgtgttacggctcgccatatcaagaacatcgagaaaaaa
ggcattaagcaattagaagtaccacatgagtacatcattggtcgcgtattagcgaaaaac
tatgttgatgagtcaacaggtgaagttgtagctaatgcaaatgacgagctaacgcttgaa
ttaatggctgaattggttaaagccggtcacactaaaattgatacgttatatatcaatgaa
gtggacagcggtgcttacatgtcaaatacattgaacattgactcttcaagcagccgttta
gaagcattagtagaaatttatcgcatgatgcgcccaggcgagccaccgacgaaagacgcg
gctgaagccttattccagaacttgttcttctcagaagagcgctatgacctatcaactgta
ggtcgtatgaagttcaatagccgtgttggttacgataccgatacaggcccaggcacatta
agcaaagaagacatcgtgtcggttatgaaagtattgattgctattcgtaacggtgttggc
gatgtagatgatattgaccacttaggcaaccgtcgtatacgtagtgttggcgaaatggct
gagaatcaattccgtgtaggtttagtgcgtgtagaacgtgctgtacgtgagcgtttaagc
ttaggtgacctagatgcgataatgccacaagatcttattaacgctaagcctatttcggca
gcggttaaagagttcttcggctcgtctcagttatcacagttcatggaccaaaataacccg
ctatcagaagtaacgcataaacgtcgtatttctgcattagggccgggcggtctaactcgt
gagcgcgcaggctttgaagtacgtgacgttcacgtaactcactatggtcgcgtatgtcca
atcgagactcctgagggtccaaacatcggtctaattaactcattatctacgtacgcacgt
actaatgattatggtttcttagaaacaccttaccgcaaagtggtagacggtgttgtaact
gatgaagttgattacctatcagccattgaagaaggtcagtttgttatcgcacaggcgaac
tcaaacttaaccgaaaccaatgagtttgtagatgaacttattccatgtcgtcacaaaggt
gaatctacctttatgggacgtatggaccagcaatatatggatgtatcaccacaacaggtg
atctctgtagcggcagcacttatcccgttcctagaacacgatgatgctaaccgtgcattg
atgggttcaaacatgcaacgtcaagcagtaccaacattgaaagcggataagccgttagta
ggtactggtattgagttaacactagcgaaagactctggtgttactatcgttgcaaaacgt
ggtggtgaagtaatgtattgtgacgcaagtcgcatcgttgttaatgtacatgaagaagaa
cgcgttccaggcgaagcgggcatcgacatttacaacttaaccaaatacacacgttctaac
caaaatacatgtattaaccaaaaaccaacttgtatggttggcgaaccggttactcgtggc
gatgtgttagcagatggtccttcgactgacttgggcgacttagctcttggtcaaaacttg
cgcgtggcatttatgccatggaatggttataacttcgaggattcaatcttactatcagag
cgcgtagttgaagaagatcgtctaacgactatccacattcaagaactacagtgtattgcc
cgtgatactaaattaggttctgaagagatcactgcagatatcccgaatgtgggcgaatct
gcactaggcaagcttgatgaatcaggcgttgtttatattggtgctgaagttaaaagcggc
gatattctagtaggtaaagtgactccgaaaggcgaaacgcaattaactcctgaagagaag
ctactacgagctatcttcggcgaaaaagcgtctgacgttaaagacagctctttacgtgta
ccaaattctgtaactggtactgtaattgacgtgcaagttttcacccgtgatggtgttgaa
aaagataagcgtgcgttagaagttgaagaaatgcagcttcgcgatgcgaagaaagacttc
aacgaagagttccgtattctagaagctggtgtattagaccgtgcgcgtaagttacttatc
gcagctggctttgatgaagacaaattagcgttattaaatgctgagaagctacttacgcaa
agccttgctgaagaagacaagcaagctgagcttgagcaattagcagcccagtatgacgag
cttaaagctgaatacgataagaagtttgaaaacaaacgtcgtaaaatcactcaaggcgat
gacctagcacctggcgtacttaagattgttaaagtatacctagctgttaaacgttgtatc
caaccgggtgataaaatggcgggtcgtcatggtaacaaaggtgttatctcgactatcgta
ccagtagaagatatgccatacgatgataaaggtcgtacggtagatatcgtacttaaccca
ctgggtgtaccatcacgtatgaacatcggtcagatccttgaaacacatatgggtctagct
gcacgtggtattggtgaacgcattgaagaaatgatgaaagagcaacgtgagctgcatgag
ttacgcgccttcatcaagcaagcctacgaaattggcgaatctcgtcaagtagtagacatt
gatagctttacagatgacgaaattcgtcgtttggctgaaaacttaaaaggtggtttacca
atagctactccagcatttgatggcgcgaaagaaaacgaaatcaaagacatgctagagctt
gcgggctacccaagaagtggtcaggttacactttatgatggccgtactggcgatcagttc
gaacgtcaagtaaccgttggttacatgtacatgctgaaactgaatcacttagttgatgac
aaaatgcatgcgcgttctactggttcttatagccttgttactcagcagccgctgggtggt
aaagcacagttcggtggccagcgttttggtgagatggaagtatgggcacttgaagcttac
ggtgctgcttacactctacaagaaatgctaacagtgaaatcggatgacgtgaacggtcgt
actaagatgtataaaaacatcgttgatggtaaccataaaatggaaccaggtatgccagaa
tcgtttaacgtattgttaaaagaaatccgctcactgggtatcaacatcgagttggaagaa
aattaa |
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