Pseudoalteromonas translucida TAC125: PSHAa0447
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Entry
PSHAa0447 CDS
T00282
Symbol
mutM
Name
(GenBank) formamidopyrimidine DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
pha
Pseudoalteromonas translucida TAC125
Pathway
pha03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pha00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PSHAa0447 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pha03400
]
PSHAa0447 (mutM)
Enzymes [BR:
pha01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
PSHAa0447 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
PSHAa0447 (mutM)
DNA repair and recombination proteins [BR:
pha03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
PSHAa0447 (mutM)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
H2TH
Fapy_DNA_glyco
zf-FPG_IleRS
Motif
Other DBs
NCBI-ProteinID:
CAI85544
UniProt:
Q3IEI2
LinkDB
All DBs
Position
I:467259..468035
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AA seq
258 aa
AA seq
DB search
MGITPHVLNQVVTKVNIHNGSMRWPVPDDVYQLTGLTVTGVERRAKYLLLHCALGSTILH
LGMSGNLRVVSANEPLKKHDHIEFIFANGKALRLNDPRRFGCCLWQAPGSVHKLLAKLGP
EPLTDEFFAKQVYQQSRNKKVPVKQFIMNNAIVVGVGNIYANESLFKAGIDPRREAGKVS
LKSFEALIPIIKDTLAAAITQGGTTLKDFAQSDGKPGYFAQQLLVYGRKGQPCLVCKSEL
QEVRLGQRSTVFCGKCQK
NT seq
777 nt
NT seq
+upstream
nt +downstream
nt
atgggcataaccccgcatgttttaaatcaagttgttactaaggtaaatattcataatggc
agcatgcgttggccggtgccagacgatgtatatcagctaacaggtttaaccgtaacgggc
gttgagcgccgcgcaaaatatttgttattacactgcgcgttaggctctactattttgcat
ttaggtatgtcgggcaatttacgtgtagtaagtgctaacgagccacttaaaaaacacgat
catatagaatttatttttgctaacggtaaagcgctgcgcttaaacgatccgcgccgcttt
ggttgctgcctatggcaagcgccgggctcagttcataagttactggcaaagctcgggcct
gagccgcttactgacgagttttttgcgaagcaggtgtatcagcaatcgcgcaataaaaaa
gtgccggtaaaacaatttataatgaataacgccatcgtcgtaggggtcggtaatatttac
gctaatgaatcgttatttaaagcgggaatagaccctcgccgcgaagccggtaaagtatcg
ctgaaaagttttgaagcgcttattcctataattaaagacacgctagccgcggcaataacc
caaggtggcactaccttaaaagattttgcccaaagcgacgggaaaccgggttactttgct
cagcaacttttagtgtacggtcgtaaagggcaaccttgcttggtgtgtaaaagcgaatta
caagaagttaggctagggcaaagaagtactgtgttttgtgggaagtgtcagaagtga
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