Pseudoalteromonas translucida TAC125: PSHAa0622
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Entry
PSHAa0622 CDS
T00282
Name
(GenBank) putative response regulator in two-component regulatory system
KO
K07715
two-component system, NtrC family, response regulator GlrR
Organism
pha
Pseudoalteromonas translucida TAC125
Pathway
pha02020
Two-component system
pha02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pha00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
PSHAa0622
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
PSHAa0622
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
pha02022
]
PSHAa0622
Two-component system [BR:
pha02022
]
NtrC family
GlrK-GlrR (amino sugar metabolism)
PSHAa0622
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
AAA_lid_14
Sigma54_activ_2
AAA_5
AAA
FleQ
AAA_2
AAA_16
TIP49
HTH_8
nSTAND6
Motif
Other DBs
NCBI-ProteinID:
CAI85707
UniProt:
Q3IK72
LinkDB
All DBs
Position
I:643378..644727
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AA seq
449 aa
AA seq
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MPAIKPQGAKVLLVDDDASLLKLLAIRIESKGYEVTTCESGLIALQILKSQVFDAVVTDL
RMDEMDGMALHRQLQSRYPALPVIMMTAHGSIPDAVEATKQGIFAFITKPIDKDELFDSL
AKAIEIHGVNADEIIPTSNIVTRSGAMLHLLEQVKLLGPTQVNVLISGASGTGKELLAQA
IHQHSHVSKGPFVAINCGAVPGELLESELFGHKKGSFTGAIKDHQGLFQQAEGGTLFLDE
IGDMPLNLQVKLLRVLQEKTIRPVGFQEEIAIDVRIVSATHKNLPEAIINQQFREDLYYR
LNVVNLKLPPLCERREDISLLAQYFSASIAKRMKQSEKHFANDAMHALVRYDWPGNIRQL
QNVVEQVVALTPSEVISEHLVLSALNSNEKNVEPLSLNDAKKEFERDYVINTLKMAGGNV
AEGAKLAKRNRSDFYKLIKKHNIDVDNLA
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgccagcaataaaaccgcaaggtgcaaaagtattattagtggatgacgatgccagctta
ttaaaattgctcgctattcgtatcgaatcaaaaggctacgaggttaccacctgcgagagc
ggcctaattgcgttacaaatattaaaaagccaagtgttcgatgccgtagtaaccgacctg
cgcatggacgaaatggatggcatggcactgcaccgccaattgcaaagccgctatccggca
ttgcccgttattatgatgacagcgcatggctctattcctgatgcggtagaggctaccaaa
caaggcatttttgcatttattaccaaaccaatagataaagacgagttattcgacagctta
gcaaaagcgatagaaatacacggcgtaaatgccgatgaaataatacccactagcaatata
gttactcgtagcggcgctatgctacatttgctagagcaagttaaactgctagggccaacg
caagttaacgtattaatatcgggagccagtggtacgggtaaagagttattagctcaagct
attcatcagcatagccatgtaagtaaaggcccatttgtagcgataaactgcggcgcagta
ccgggtgaactgctagagtcagaattatttggtcataaaaaaggctcgtttactggggca
ataaaagatcaccaaggactgtttcaacaagctgagggaggcaccttatttttagatgaa
ataggtgatatgccgcttaatttacaagttaagttactgcgcgtattgcaagaaaaaacc
atacgtccagtcggctttcaagaagaaatagccatagatgttcgcattgtatcggcaact
cataaaaacctccccgaagcgattataaatcagcagtttagggaggatttatactaccgc
ttaaacgtggttaatttaaaactccctcctttgtgcgagcgtcgcgaagatataagtcta
cttgcacaatactttagcgccagtattgcaaagcgaatgaagcaaagcgaaaaacacttt
gccaacgacgccatgcacgcactcgtgcgttacgactggccaggtaatattcgccaactt
caaaacgtggtagagcaagttgtagcacttaccccaagcgaagttatttcagagcattta
gtgctaagtgcattaaatagcaacgaaaaaaatgtagagccattgtcgctaaacgacgct
aaaaaagaatttgaacgcgactacgtaataaacacccttaaaatggctggtggaaatgtc
gccgaaggcgcaaaactagctaaacgtaaccgttcagatttttataaactgattaaaaag
cacaatatagatgttgataatttagcttaa
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