Pseudoalteromonas translucida TAC125: PSHAa0738
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Entry
PSHAa0738 CDS
T00282
Symbol
rumA
Name
(GenBank) 23S rRNA (uracil-5)-methyltransferase, responsible for modification at position U1939, SAM-dependent
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
pha
Pseudoalteromonas translucida TAC125
Brite
KEGG Orthology (KO) [BR:
pha00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pha03009
]
PSHAa0738 (rumA)
Enzymes [BR:
pha01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
PSHAa0738 (rumA)
Ribosome biogenesis [BR:
pha03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
PSHAa0738 (rumA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
TRAM
MTS
Methyltransf_25
Met_10
Methyltransf_15
Methyltransf_23
FtsJ
Cons_hypoth95
PrmA
PCMT
Methyltransf_11
N6_N4_Mtase
Methyltransf_4
RrnaAD
DOT1
DNA_methylase
Motif
Other DBs
NCBI-ProteinID:
CAI85821
UniProt:
Q3IDM6
LinkDB
All DBs
Position
I:771004..772329
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AA seq
441 aa
AA seq
DB search
MAQIFKATKKPLKQQSLVLDITAMDHHGRGIAKHNNKVCFVSNALPNEQVKATIIADKAR
YSEAQTHKVLQASEYRVAPFCEHYNQCGGCQLQHLDSSQQVVEKQIAVSKLFEKFAKLDE
LNWQAPLLSKATHYRRSARLAVMFDKKAKKMHVGYRASGSKSIISINECPVLSEVFANVF
TVFDNLINQHKALHSVSHLQLCQGDEQNFVIIRHTKPISEDIKALVAQSAAEQQWQLVWQ
SESEVIEHSHLAMPFYALEELGLKFEFGLNNFIQVNASVNQAMLKQAQNWLALKGDENVL
DLFCGIGNFSLVLAKQAKTVIGVEGVASAVAMATQNAHTNSITNAQFNCFDLTNKIETAS
WFNKNLDVLVLDPSRTGAITVLEQLPLKQFKTILYVSCDPVTLARDSAIISQAGFELHKI
GLMNMFPHTGHIETMALFQRR
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atggcgcaaatatttaaagcaacaaaaaaaccgctaaaacaacagtctttagtgctcgat
atcaccgccatggatcaccatggtcgcggcatagctaaacataataataaagtgtgcttt
gtaagtaatgctttgccaaacgagcaagtaaaagccaccattatcgccgacaaagcgcgt
tatagcgaagcgcaaacgcataaagtattacaggcgagtgaatatcgcgtagcgccgttt
tgtgagcattataatcaatgtggtggttgtcagttgcagcatttagatagcagccaacag
gtagtcgaaaagcaaatagcagtgagcaaattatttgaaaagtttgccaagcttgatgaa
ttaaactggcaagcacccttattaagtaaagccactcattaccgacgaagtgctcgttta
gcggtaatgtttgataaaaaagcaaaaaaaatgcatgtaggctatagagcaagtggctct
aaaagtattattagtattaatgagtgcccagtactaagtgaagtatttgcaaatgtattt
actgtatttgataacttaattaatcaacacaaggcattgcacagtgtatctcacttgcaa
ttgtgccaaggcgatgagcaaaactttgttattattcgccacacaaaacctatttcagag
gatataaaagcactggtagcacaaagtgccgctgagcaacaatggcaattagtgtggcaa
agcgaaagtgaagtgattgaacactcacatttagccatgccattttatgcacttgaagag
ttagggttaaagtttgaatttggcttaaataactttatccaagttaatgctagcgttaat
caagcaatgcttaaacaagcacaaaattggctggcactaaaaggcgacgaaaacgtattg
gatttattttgtggtattggtaacttttcactagtgctggcaaaacaagcaaaaacagta
attggtgtagaaggggttgcttcagcggttgcaatggcaacgcaaaatgcgcacactaac
tcaatcactaatgctcaatttaattgctttgatttaacaaataaaattgaaacggcttcg
tggtttaataaaaatttagatgtactggtgttagacccctcacgtactggggcaataacg
gtattagaacaacttcctttaaagcagtttaaaactattttatacgtctcatgcgaccct
gttactttagcccgtgacagcgctattatttcgcaagcaggctttgaactgcataaaatt
gggctaatgaatatgtttccgcacaccggacatattgaaactatggcgttatttcaacgg
aggtaa
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