Pseudoalteromonas translucida TAC125: PSHAa0790
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Entry
PSHAa0790 CDS
T00282
Symbol
flaM
Name
(GenBank) putative Sigma-54 dependent response regulator; regulation of polar flagellae expression
KO
K10943
two-component system, response regulator FlrC
Organism
pha
Pseudoalteromonas translucida TAC125
Pathway
pha02020
Two-component system
pha02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
pha00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
PSHAa0790 (flaM)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
PSHAa0790 (flaM)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
pha02022
]
PSHAa0790 (flaM)
02035 Bacterial motility proteins [BR:
pha02035
]
PSHAa0790 (flaM)
Two-component system [BR:
pha02022
]
Other families
FlrB-FlrC (polar flagellar synthesis)
PSHAa0790 (flaM)
Bacterial motility proteins [BR:
pha02035
]
Flagellar system
Flagellar assembly proteins
Others
PSHAa0790 (flaM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
HTH_8
AAA_2
AAA_5
HTH_30
FleQ
MFD_D3
DUF2089
AAA_16
MerR
HTH_20
AAA
HTH_24
AAA_19
HTH_23
Motif
Other DBs
NCBI-ProteinID:
CAI85871
UniProt:
Q3IDY1
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All DBs
Position
I:821814..823274
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AA seq
486 aa
AA seq
DB search
MSNTILVVEDDAGLREALIDTLEMSGIECVAADSAEQAMLLLKKESFSLVVSDVQMGAMS
GLDLLRSIKLNYPDLPVLMMTAYATIDDAVEAMRLGAIDYMAKPFAPEVLLNMVSRYLPE
KPKETDGPIVADPTSIQLLELASRVAKSDASVMVLGPSGSGKEVLARFIHDKSARAAKPF
VAINCAAIPENMLEATLFGYEKGAFTGAIQACPGKFEQAQGGTILLDEITEMDLGLQVKL
LRVLQEREVERLGSRKTIALDVRILATSNRDLKQAVANNQFREDLYYRLNVFPLMWRPLC
ERPGDIIVLAKHLIERHLIKAKQPLAILDKQAEQKLLSHTWPGNVRELDNVIQRALILRS
GNSIGEQAIFIENLAPSNFVVEPAISESALTSAYYDSKTTAIINDEKSGDEKLDDQTPNE
QKSDLLAQDTGSYKDELKDKEHRIILETLARCQGKRKDVAETLGISPRTLRYKLAQMRDL
GISLPA
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atgagtaatactattttagttgtagaggacgacgcagggcttcgcgaagcattaatagat
actctagaaatgtcgggtattgaatgcgttgctgccgacagtgcagagcaggcgatgtta
ctactaaaaaaagaatccttttcgttagtggtgagcgatgtgcaaatgggcgctatgagc
ggcctagatttactgcgcagtattaaattaaattaccccgatttaccggtattaatgatg
accgcctacgcaactattgacgatgcggtagaggcaatgcgcttaggcgcgattgattat
atggccaaaccatttgcacccgaggtgctattaaatatggtgagccgctatttgcccgaa
aaacccaaagaaaccgacggccctattgttgccgacccaacgagtattcaattgctggag
cttgcaagcagggtagctaaatcagacgccagtgttatggtgctggggccaagtggctcg
ggtaaagaagtattagcgcggtttattcatgataaatcagcgcgtgctgcaaagcccttt
gtggctattaactgtgcggcgattcctgaaaacatgctagaagcaacattatttggctac
gaaaaaggcgcttttactggcgcgattcaggcatgtccaggtaagtttgagcaagcgcag
ggcggtactattttacttgatgaaattaccgaaatggatttaggcttacaagttaaacta
ctgcgtgtattacaagagcgcgaagttgagcgcttagggagtcgtaaaaccattgcgcta
gatgtacgcatactcgcaaccagtaaccgcgatttaaaacaagcggtagcgaataatcag
tttagggaagatttatattatcgccttaacgtttttccgctaatgtggcggccattgtgc
gagcgccctggcgatataattgtgttggcgaagcacttaattgaacgccatttaattaaa
gctaagcagccgctggctattttagataagcaagctgaacaaaagctgcttagccataca
tggccaggtaatgtgcgtgagcttgataacgtaattcagcgtgcgcttatactgcgcagt
ggcaacagcataggtgagcaagctatttttattgaaaatttagccccaagtaactttgta
gtagagccagcaattagtgaaagtgcgttaactagcgcctattacgatagtaaaacaaca
gccattattaatgacgaaaagtcgggtgatgaaaagcttgatgatcaaacaccgaatgag
caaaaatcagatttactcgctcaagatacaggcagttataaagatgagcttaaagataaa
gagcatcgaattattttagaaacacttgcgcgttgccaaggcaagcgtaaagacgtagcc
gaaaccttgggtattagcccgcgaactttacgttataaactagcgcaaatgcgcgactta
ggtatttcacttcctgcataa
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