Pseudoalteromonas translucida TAC125: PSHAa0999
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Entry
PSHAa0999 CDS
T00282
Symbol
truB
Name
(GenBank) tRNA pseudouridine 5S synthase
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
pha
Pseudoalteromonas translucida TAC125
Brite
KEGG Orthology (KO) [BR:
pha00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pha03016
]
PSHAa0999 (truB)
Enzymes [BR:
pha01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
PSHAa0999 (truB)
Transfer RNA biogenesis [BR:
pha03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
PSHAa0999 (truB)
Prokaryotic type
PSHAa0999 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
CAI86077
UniProt:
Q3IJ75
LinkDB
All DBs
Position
I:1036215..1037174
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AA seq
319 aa
AA seq
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MAKRSKGRPVDGILLLNKPIGISSNKALQQTKGVYFAQKAGHTGALDPLATGMLPICFGE
ATKFTQFLLDTDKTYVVRAKLGERTTTSDSDGEIVSTKDVNVTREQLIKEIAAFVGESDQ
YPSMYSALKYQGRPLYKYAREGIEVPRKCRKINVFSLTFDEFDEVNNVIQMTAHVSKGTY
IRTIVDDLGEKLGCGAHVVMLHRTAVGQYPAEKMVSLDEIEALLAKAKDEEVAPSTYLDA
LLLPLDTALVDLPVVEISKEQGSIFSHGQAIDLDIDLPEGAIKVVADGIFIGTGERNASG
HLKVKRGLASQQDDYVKPE
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagcgcagtaaaggccgtccagttgacggtattttgttgttaaacaaaccaatt
ggcatttcatcaaataaagcactacagcaaacaaaaggtgtgtactttgcacaaaaggcg
gggcacacaggtgcactagatccattggcaaccggtatgctgcctatttgctttggtgag
gcaaccaagtttacacagtttttactcgatacagacaaaacctatgtggtacgcgctaaa
ttaggcgagagaacaacgacatcagattctgatggtgaaattgttagcactaaagatgta
aatgtaacgcgtgaacaactgattaaagaaattgccgcttttgttggtgagtcagatcag
tacccgtcaatgtactcggcgcttaagtatcaaggtaggcctttatataagtatgcacgc
gagggtattgaagtaccacgtaaatgcagaaaaataaacgtgtttagcttaacgtttgac
gaatttgatgaagtgaataacgtaatacaaatgacggcgcatgtatctaaaggcacctac
attcgtactattgttgacgacttaggtgaaaagctaggttgtggcgcacacgttgttatg
ctgcaccgcactgcggttggtcaatatcctgcagaaaaaatggtgtcgctagatgaaatt
gaagcgttattagcaaaagctaaagacgaagaagttgcaccttctacttatttagacgcg
ttgttattgccactcgatacagctttagttgatttaccggttgttgagataagtaaagag
cagggcagtatttttagtcacggccaagcaatagaccttgatatagatttgcctgaaggc
gcaattaaggttgtagctgacggtatttttattggtacaggcgagcgtaatgccagcggc
catttaaaagttaaacgtggcttggccagccaacaagatgattatgtaaaacccgaataa
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