Pseudoalteromonas translucida TAC125: PSHAa1238
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Entry
PSHAa1238 CDS
T00282
Name
(GenBank) ribosomal large subunit pseudouridine synthase A (Pseudouridylate synthase, 23S RNA-specific)
KO
K06177
tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:
5.4.99.28
5.4.99.29
]
Organism
pha
Pseudoalteromonas translucida TAC125
Brite
KEGG Orthology (KO) [BR:
pha00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pha03009
]
PSHAa1238
03016 Transfer RNA biogenesis [BR:
pha03016
]
PSHAa1238
Enzymes [BR:
pha01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.28 tRNA pseudouridine32 synthase
PSHAa1238
5.4.99.29 23S rRNA pseudouridine746 synthase
PSHAa1238
Ribosome biogenesis [BR:
pha03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
PSHAa1238
Transfer RNA biogenesis [BR:
pha03016
]
Prokaryotic type
tRNA modification factors
Psudouridine synthases
PSHAa1238
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
Osmo_CC
Cep57_MT_bd
DUF1501
Motif
Other DBs
NCBI-ProteinID:
CAI86313
UniProt:
Q3IKS1
LinkDB
All DBs
Position
I:complement(1287406..1289118)
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AA seq
570 aa
AA seq
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MANYLVKNFIIILPMPNIASCFTPFSAPVNHMALPDKFTFPFYYEPKAIAVAATEQLQQQ
LETQLEYLANPANNEESGKMFGVLVVQNNQQQLGYLAAYSGQLEGVSSKINFVPAVADMQ
LHDAEYLAQSSIINNINAQIEQLENSEQFSTLNNAFNQANATYQQQLEAQQALMQVSRRM
RKQQRTDASTQLSPTDFEQLKIQLAGQSIVEKKQLQALKQQWQSKLDTLQQALNNITDEI
AHLKKRRKTLSKSLQKKLFAQYQFLNANKETKDLNAIFAPLPEHTPPAGAGDCAAPKLLQ
YAYQHNLKPLALAEFWWGAAPKSAIRHHKHYYPSCYSKCQPILGHMLKGLHVEENPLLIN
PAIGKDLTIIYQDQDILVINKPAEFLSVPGVNIEDSVYLRIKTQFPHATGPLIVHRLDMS
TSGLLIIALNKRAHKALQKQFIERTIEKRYVALVAGNVVQNSGTIDLPLRLDFDDKPRQL
VCYQHGKASLTTWQVLERKDNITRLHLYPKTGRTHQLRVHCAHKLGLNMPIVGDDHYGEK
ANRLHLHAEYLSFCHPINHQQLEFEVAPDF
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
ttggctaattatcttgttaaaaacttcattattatattgcccatgccaaatattgcttct
tgctttacgccattttcagcgcctgtaaatcacatggcgctaccagataaatttactttt
cctttttactatgagcctaaagcaattgctgtagcagcaaccgagcagttgcaacaacag
ctcgaaacacagttagagtacttggcaaacccagctaataatgaagagtcgggtaaaatg
tttggcgtactcgtggtgcaaaataatcagcaacagcttggttatttagccgcttactcg
gggcaacttgagggcgtaagcagtaaaattaactttgtacctgccgtggccgatatgcag
ctacacgatgctgagtatttagcacaaagcagcattattaataatattaacgcccaaatt
gagcagctagaaaatagtgagcaatttagcactcttaataacgcatttaaccaagccaat
gccacttatcagcagcagttagaagcgcagcaagcgttaatgcaagttagccgccgaatg
cgtaaacaacaacgcactgatgcaagcactcagttatccccaactgactttgagcagcta
aaaattcagttagcagggcaaagtattgtcgaaaaaaagcaactgcaagcactaaagcag
caatggcaaagtaaactcgacaccctgcagcaagctctaaataatattactgatgaaatt
gcacacttaaaaaaacgtcgtaaaacactttctaaaagcttacaaaaaaagctgtttgcg
caataccaatttttaaatgctaataaagaaactaaagatctaaacgctatttttgcaccc
ttgcctgagcatacgccaccagcaggtgcaggagattgcgccgcgcctaagttattgcaa
tatgcgtatcaacataatttaaaacctttagctttggcagaattttggtggggcgctgcg
cctaaatcagctattaggcatcataaacattactacccgtcttgttatagtaaatgccaa
cccattttagggcatatgctcaaaggcttacatgtagaagaaaatccattattgatcaac
cctgctattggtaaagatttaactattatttaccaagatcaggacatattagtgatcaat
aaaccagctgaatttttgtccgttcctggggttaatattgaagactcggtttatttgcgc
attaaaacacaatttccacatgctaccggcccgctcattgtgcatcgcttagatatgtca
acgtcagggttattaattattgcactcaataaaagagcgcataaagccctgcaaaaacag
tttatagagcgtaccatagaaaaacgttacgttgctttagttgccggaaatgtagttcaa
aacagtggtacaattgatttacctctgcgcttagattttgatgacaaaccgcgccaatta
gtgtgttatcaacacggtaaagcatcccttactacttggcaggtgttagagcgaaaagat
aatattacccgcttgcacctttaccctaaaacggggcgtacgcaccagctaagagtgcat
tgcgcgcataagttaggcttaaatatgcccatagttggtgatgatcactacggtgaaaaa
gccaatagattacatttacatgccgagtacttatcgttttgccacccgattaatcatcag
cagttagagtttgaagtagcgcccgacttttaa
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