Pseudoalteromonas translucida TAC125: PSHAa1425
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Entry
PSHAa1425 CDS
T00282
Symbol
rpsA
Name
(GenBank) 30S ribosomal subunit protein S1; site specific RNA helicase; component of the degradosome
KO
K02945
small subunit ribosomal protein S1
Organism
pha
Pseudoalteromonas translucida TAC125
Pathway
pha03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
pha00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
PSHAa1425 (rpsA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
pha03011
]
PSHAa1425 (rpsA)
Ribosome [BR:
pha03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
PSHAa1425 (rpsA)
Bacteria
PSHAa1425 (rpsA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
S1
S1_RRP5
OB_PDCD11
Spt6_S1
CsrA
UPF1_1B_dom
DUF1955
YonK
Motif
Other DBs
NCBI-ProteinID:
CAI86500
UniProt:
Q3ILA0
LinkDB
All DBs
Position
I:1500347..1502014
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AA seq
555 aa
AA seq
DB search
MSENFAQLFEESLKGFEAEQGSIVKGTVISIENNIVLVDAGLKSESAIPAEQFKNAAGEL
EVAVGDEVDVALDAIEDGFGETILSREKAKRHEAWIRLEKACEEQETVTGVINGKVKGGF
TVEVDSIRAFLPGSLVDVRPVRDTTHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSQ
EREELLANLVEGQEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDE
IAVKVLKFDKDKTRVSLGLKQLGEDPWAAIAGRYPEGSKLSGRVTNLTDYGCFVEIEEGV
EGLVHVSEMDWTNKNIHPSKVVSLGDSVEVMVLEIDEERRRISLGLKQCIANPWQEFARL
QNKGDQVTGKIKSITDFGIFIGLDGGIDGLVHLSDISWNTPGEDAVREFKKGDEITAIVL
QVDPERERISLGVKQIEADPFNNYLDANKKGAIVKGKVTEVDAKGATIELIEGVEGYIRV
ADIAQERVEDATTVVSVGDEIEVKYVGVDRKNRTLSLSVKALFEAEEKEVIEKLKKDEPV
FENAMAAAFANAQKD
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaaaattttgcgcagttatttgaagaaagcttaaagggttttgaagcagagcaa
ggctctatcgttaaaggtacagtaatctcaatcgagaacaacattgtacttgtagatgct
ggtcttaaatcagaaagtgctatccctgctgagcagttcaaaaatgctgctggtgaactt
gaagttgctgttggcgacgaagtagatgttgcactagatgcaattgaagacggtttcggt
gaaactatcctttctcgtgagaaagcgaagcgtcacgaagcgtggatccgtcttgagaaa
gcatgtgaagagcaagaaactgttactggtgttatcaacggtaaagttaaaggcggtttc
acagttgaagttgattcaatccgtgctttcctacctggttcacttgttgatgttcgtcca
gtacgtgacacaactcaccttgaaggcaaagagcttgaatttaaagtaatcaagcttgat
caaaaacgtaacaacgttgttgtttcacgtcgtgcagttatcgaatctgaaaactcacaa
gaacgtgaagagcttcttgctaaccttgttgaaggccaagaagttaaaggtatcgttaag
aaccttactgactacggtgcattcgttgaccttggtggtgttgatggtctactacacatt
actgatatggcgtggaagcgtgttaagcacccttcagaaatcgttaatgttggcgacgaa
atcgcagttaaagttcttaaattcgacaaagataaaactcgtgtatctctaggccttaaa
cagcttggcgaagatccatgggcagctatcgctggtcgttacccagaaggttctaaactt
tctggtcgtgttactaaccttacagattacggctgtttcgtggaaatcgaagaaggcgtt
gaaggtttagttcacgtttctgaaatggattggactaacaagaacatccatccttcaaaa
gttgttagccttggcgacagcgttgaagttatggttcttgaaatcgacgaagaacgtcgt
cgtatttctcttggtcttaagcaatgtattgctaatccttggcaggaatttgctcgtcta
caaaacaaaggcgaccaagttactggtaagatcaaatcaatcactgacttcggtatcttt
atcggtcttgacggtggtattgatggtcttgtacacctttcagacatttcttggaataca
cctggcgaagacgctgtacgtgaattcaagaaaggcgacgaaatcactgctatcgtattg
caagttgacccagagcgcgaacgtatctctctaggtgttaagcaaatcgaagctgaccca
ttcaataactaccttgatgcaaacaaaaaaggtgctattgttaaaggtaaagtgactgaa
gttgatgctaaaggcgcaactattgaacttatcgaaggcgttgaaggttacatccgtgta
gctgatatcgctcaagagcgcgttgaagatgcaactactgttgtttctgtaggcgacgaa
attgaagttaaatatgttggtgttgatcgcaagaaccgcactttaagcttatctgttaaa
gctcttttcgaagctgaagagaaagaagtaatagaaaagcttaagaaagacgagccagtg
tttgaaaacgcaatggctgctgctttcgcaaatgcacaaaaagactaa
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