Pseudoalteromonas translucida TAC125: PSHAa1435
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Entry
PSHAa1435 CDS
T00282
Name
(GenBank) putative DNA polymerase III, epsilon subunit
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
pha
Pseudoalteromonas translucida TAC125
Pathway
pha03030
DNA replication
pha03430
Mismatch repair
pha03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pha00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PSHAa1435
03430 Mismatch repair
PSHAa1435
03440 Homologous recombination
PSHAa1435
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pha03032
]
PSHAa1435
03400 DNA repair and recombination proteins [BR:
pha03400
]
PSHAa1435
Enzymes [BR:
pha01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PSHAa1435
DNA replication proteins [BR:
pha03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PSHAa1435
DNA repair and recombination proteins [BR:
pha03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PSHAa1435
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
CAF1
DUF6151
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
CAI86510
UniProt:
Q3IGA1
LinkDB
All DBs
Position
I:1510512..1511222
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AA seq
236 aa
AA seq
DB search
MSKQKQAIVDWSLRYQQLANSSENALLQQFYASAFNQPAAAIADVPFVAMDFETTGLDSE
ADDIVSVGLVPFNLQRIYCKHSRHWVVQPRRNLHEESIIIHGITHSEVDDAPDFNRIIEP
LLAALSGKVVVVHYAAIERPFLNNALLLRLHEGIEFALVDTMDIEKRALTARQGLIGRLF
NSKIGSLRLNDCRKRYSLPAYNNHNALTDALATAELLQAQLSHHYRLDTPIDDLWI
NT seq
711 nt
NT seq
+upstream
nt +downstream
nt
atgagcaagcaaaagcaagcaatagttgactggtcgcttaggtatcagcaattagcaaat
agcagtgaaaatgccttgttacagcagttttatgcatcggcttttaatcagcctgctgca
gcaatagctgatgtgccatttgtagcgatggattttgaaaccaccggcttagatagcgaa
gcagatgacatagtgagtgtgggtttagtgccttttaacttacagcgaatatactgcaag
cacagccgccattgggtagtacaaccgcgcagaaacttacatgaagaatcaataatcatt
catggtattacgcactcagaggttgatgatgcaccagactttaatcgtattattgagcct
ttgcttgccgcgctaagcggtaaagtcgtggtggtacattatgcagcaattgagcggcca
tttttaaataatgcgttgttacttaggctgcacgaaggcatagagtttgcgttagttgac
actatggatattgaaaaaagagcattaacagcacgccagggtttaatagggcggttattt
aactctaaaataggctcgttgcgattaaatgattgtcgtaagcgctactcacttcctgcg
tataataaccataatgccctaactgatgcattggccacagctgagttgttacaagcgcag
ctgagtcatcattatcgcttagatacgccgatagatgatttgtggatataa
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