Pseudoalteromonas translucida TAC125: PSHAa1661
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Entry
PSHAa1661 CDS
T00282
Symbol
msbA
Name
(GenBank) lipid transport protein, flippase (ABC superfamily, membrane (N-terminal), atp_bind (C-terminal)) In E.coli MsbA plays a role in lipid A and possibly glycerophospholipid transport
KO
K11085
ATP-binding cassette, subfamily B, bacterial MsbA [EC:
7.5.2.6
]
Organism
pha
Pseudoalteromonas translucida TAC125
Pathway
pha02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
pha00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
PSHAa1661 (msbA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pha02000
]
PSHAa1661 (msbA)
Enzymes [BR:
pha01000
]
7. Translocases
7.5 Catalysing the translocation of carbohydrates and their derivatives
7.5.2 Linked to the hydrolysis of a nucleoside triphosphate
7.5.2.6 ABC-type lipid A-core oligosaccharide transporter
PSHAa1661 (msbA)
Transporters [BR:
pha02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
PSHAa1661 (msbA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_22
RsgA_GTPase
AAA_29
ABC_ATPase
AmpE
AAA_16
MMR_HSR1
AAA_25
APS_kinase
nSTAND3
AAA_18
DUF2207_C
Motif
Other DBs
NCBI-ProteinID:
CAI86734
UniProt:
Q3IGX5
LinkDB
All DBs
Position
I:complement(1728317..1730062)
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AA seq
581 aa
AA seq
DB search
MDQSTTQIYKRLISYVGAYRTVAIVAIIGMIGYSGMDALFIQLMKPFIDEGLNERNADVL
KYAPFVVIALVIGRGVFNFMSSYCLSYVGSQVVRSLRQELFEHILHLPVSFHDKNSTGDL
ISKITFDTEQVQQAITKALLIVVREGAFVVFLLAVMFYTSWQLSLIFLVIIPLVAVIVTV
VSKRFRHISKSIQSAMGQVTRSSEQMLSGHKVIHGFGGQNQEIDQFSKVNNHNRQQRIKM
DATKALSVSIIQVLAASAMAVILWVVSMPSMIDTISSGDFVVLISSMMMLLRPLKQLANV
NSDMQRGVSAAQSVFLILDEEVEKDTGTVSVDKVKGLIEVKNVTFKYPTKDEPVLNNLSL
TIKAGESIALVGRSGSGKSTISNLLPRYYDLEAPSEILLDGIALHDYKLTDLRRQFALVS
QQVVLFNDSIANNICYGLQREISQQELEKVAKQAHVWEFVKDLPEQLNTMVGENGVMLSG
GQRQRIAIARAILKDAPILILDEATSALDTESEKLIQQALEALMKDKTSIVIAHRLSTIE
NSDRIYVIDNGSVIESGDHLSLLANNGTYSALCKMQFGEQG
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
atggatcaaagtactacacaaatttataaacgtcttatttcttacgttggtgcgtacaga
acagtcgccatcgtcgctattattggcatgatagggtattcaggtatggatgctttattt
attcagcttatgaagccgtttattgacgaaggtcttaatgagcgcaatgctgatgtatta
aaatatgcaccatttgtagttattgctttggtaatagggcgtggtgtatttaactttatg
tcgtcttattgtttgagttatgtaggctcacaagttgtacgctcgctgcgccaagagttg
tttgaacatattctacatttaccggtatcgtttcatgataaaaattccaccggcgatctt
atttccaaaataacctttgataccgaacaagtacaacaagctattaccaaggcattatta
attgtagtgcgtgaaggcgcttttgtggtgtttttactcgcagttatgttttataccagt
tggcaattatcgctgatatttttagttattattcctttagttgctgtcatagtcactgtt
gtgtcaaagcgctttagacacatttctaaaagtattcaatcagctatggggcaagttact
cgtagctcagagcaaatgctaagcggtcataaagtgatccatggttttggtggtcaaaat
caagaaatagatcagttttcaaaagtaaataatcataatcgtcagcaacgaattaaaatg
gacgcaactaaagccttgagtgtatcaatcattcaagtattggctgccagcgctatggcg
gttattttatgggttgtgtcaatgccttcgatgattgacaccataagctcaggcgacttt
gtagtattaatttcatcaatgatgatgttacttcgcccgcttaaacagctagctaatgta
aacagtgatatgcagcgaggagtttcagccgcgcaaagtgtgtttttaatactcgacgag
gaagtagaaaaagacacaggtactgtaagcgtagataaagtaaaaggcttgattgaagtt
aaaaatgtcacctttaaatacccaactaaagatgagccggtattaaacaatttatcgtta
acgattaaagcgggtgaaagcattgctttagttgggcgttcgggctcaggtaaatctact
atttctaacctattgccacgttattatgatttagaagcgcctagtgaaattttactcgat
ggcattgcactgcatgattataagctaaccgatttacgtcgtcagtttgcgctagtgtcg
caacaagtggtgttatttaacgactccattgccaataatatttgttacggtttacagcgt
gaaatatcgcagcaagaactggaaaaagtagccaagcaagcacatgtatgggagtttgta
aaagacttaccagagcagctaaatactatggttggcgaaaatggggtaatgctctctggt
ggtcaacgccaacgtattgctattgctcgtgcaatattaaaagatgcgcctattttaatc
cttgatgaagcaacatctgcgctcgatactgaatcagaaaaactaattcagcaagcactc
gaggcattaatgaaagacaaaacctcgattgtaattgcgcatcgcttatcgacgatagaa
aatagcgaccgaatttatgttatagataatggcagtgttattgaaagtggcgatcattta
agtttactggcaaataatggcacttattcagcattatgcaaaatgcaatttggtgagcaa
gggtga
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