Pseudoalteromonas translucida TAC125: PSHAa1859
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Entry
PSHAa1859 CDS
T00282
Symbol
recC
Name
(GenBank) exonuclease V, gamma chain with recB and recD: 5' and 3' nuclease, ATPase, recombinase, helicase
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
pha
Pseudoalteromonas translucida TAC125
Pathway
pha03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pha00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
PSHAa1859 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pha03400
]
PSHAa1859 (recC)
Enzymes [BR:
pha01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
PSHAa1859 (recC)
DNA repair and recombination proteins [BR:
pha03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
PSHAa1859 (recC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
CAI86931
UniProt:
Q3IJ13
LinkDB
All DBs
Position
I:complement(1957419..1960718)
Genome browser
AA seq
1099 aa
AA seq
DB search
MLNIIQSNRMEALQAQFHQLLKTNPLASPFDKEVVLVQSPGMSQWLKIGLSENLGVAAQV
DFPLPSSFIWQLYQQLLPNVPKESAFNKPNLAWKLFAILPSCIDEPLYLPLKTYLEGDID
GQKTFALCEKIADVYDQYLMYRPHWIATWDSGIDELDDVDVTIAPWQPDLWRRIVQLSLE
LGQSQFHRANMQGQLLAALETMDNSLLPQRISLFGISAIASSQLEVFTALSEKTEVFLFF
FNPSEHYWGDIIDEKTAAKISAKYAKMPLVEAQQKKQTNPDEEYYFIGNPLLSSWGKLGR
DYFEQLVQLDARWIDGFIDVFDDTLLGQIQSEIYQLAFKGESLTDNKEWFINDEGKLPIS
ATDTSITLSDCHTPLREVERLHDYLLNLFNQNPALTPKDIIVMMPDVGTYSPYIEAVFGG
AQGSRFIPYALADLAIEQENPVLSSFASLANLPFSRFGVSDILDLLQVTQIAEKFGLEAH
EYEQIQYWLERVGVKWGINADHKSSFDLPAIDLNTWQHGLNRLLLGIAMRDEQCPFNGIY
SADEVEGMALDTLNKLVHFIDVLQSFKEQLTPDDTLTNKAHVLSELLSAIYESESDDSWD
LLVLQNVLEELQKHHNNGDYSKAVSQRIVSYLIKQGIQEKGVGQRFLVGQVNFCTLMPMR
AVPFKVVCMLGLNDADYPRNVQPIGFDLVPYSKKQKGDRSRKLDDRYLFLEALLSARDNL
YMSYIGRSCFDNQPRMPSTLVSELLEYIGRSFALSDDSEKTLPECLISQQHLQPFNSHYY
LANEQANTVLSNHSYNPIWLPSESITPQVVSALNATPPEQLELDVFIRSVCNAQESFYQQ
SLGLRLPQFNEVVKDEEPFSLDALRRYFYLDEILEANINELPLSTEQILQRGELPQANVG
SLIFESMQHRVDALAGQVKEQIKGGKSDPIEVALELENTKIEGWLNHIYLQKQVFYRSAS
IKAKDLIKGFIYHLVAQSMEQQVETLILGLDKQVTFAPISKTDADALLVDWFELYKALRN
EPVAFFPVSGYEYVKSGGDIAKAMSKFSPQYIGRGEGENPYIRLTVQSLNDCQDEFIQWS
DKLLAPLFAHAKESDHASA
NT seq
3300 nt
NT seq
+upstream
nt +downstream
nt
atgctcaatattattcaatcaaaccgtatggaagcactgcaagcgcagtttcatcagtta
ttaaaaaccaacccattagcaagcccattcgacaaagaagtggtactggtgcagtcaccg
ggtatgtcgcagtggctaaaaattggtttgagcgaaaacttaggtgtagcggcgcaggtg
gattttccgctgccttcgagctttatttggcagttgtatcagcaacttttaccaaatgta
cctaaagagtcggcgtttaataaacccaaccttgcatggaaactgtttgctattttacca
agctgtattgatgagccactgtatttaccgctaaaaacctatttagagggcgatattgac
ggccaaaaaacctttgccttgtgtgaaaaaatagccgacgtgtacgaccaatatttaatg
taccgcccgcattggattgccacatgggatagcggtatagatgaacttgatgatgttgat
gtaaccattgccccgtggcaacctgatttatggcgacgcattgtacagttaagcctagag
cttgggcaaagtcagtttcatcgcgcgaatatgcaaggacaactgctggcagcgcttgag
acaatggacaacagcttattaccacaacgcattagtttatttggtatatcggccattgcc
agctcgcagcttgaagtatttacagcgctgagtgaaaaaaccgaggtgtttttattcttt
tttaatcccagtgagcattattggggcgatattattgatgaaaaaaccgccgctaaaata
agtgcaaaatacgccaaaatgccgctggtggaagcgcagcaaaaaaagcaaactaatccc
gatgaagaatactactttataggcaacccactgttatcctcgtggggtaaattaggtcgc
gattactttgagcagctagtacagctagacgcccgttggattgatggttttattgatgtg
tttgacgacaccttacttgggcaaatacaaagtgaaatttatcagttggcgtttaaaggt
gagtcactgaccgataacaaagagtggtttataaacgacgaaggtaaattgcctataagt
gcaaccgacaccagtattacgctaagcgattgccatacaccgcttcgagaagttgagcgc
ctgcacgactacttacttaatttatttaatcaaaaccctgcgcttacccccaaagacata
atagtaatgatgcccgatgtaggcacttacagcccgtacattgaagccgtttttggtggc
gcacaaggcagccgctttattccttacgcacttgccgatttagccatagagcaagaaaac
cccgtacttagctcatttgcgagtttagctaatttaccgttttcgcgctttggtgtgtcg
gatattctcgatttattacaagtgacacaaatagccgaaaaatttggcctggaggcacac
gagtacgagcaaattcaatattggctggaacgtgttggcgttaaatggggcataaatgcc
gatcataaaagcagctttgatttacccgctatcgatttaaatacctggcaacacgggctt
aaccgtttattactaggtattgcgatgcgcgacgagcaatgcccgtttaacggcatttat
agcgccgatgaagtagaaggcatggcgcttgatacgcttaataagctagtgcattttatt
gatgtgctacaaagctttaaagagcaattaacgcccgacgatacgcttaccaacaaagcg
catgttttaagcgagttgcttagtgcaatttacgagagcgaaagcgacgacagctgggat
ttattggtgctgcaaaacgtgctcgaagagttacaaaagcatcataataatggcgactac
agcaaagcggtatcgcagcgtattgttagttacttaattaaacaaggcattcaagaaaaa
ggcgtagggcagcggtttttagtggggcaagttaacttttgtaccctaatgccaatgcgc
gccgtgccatttaaagtggtgtgtatgctgggtttgaatgatgccgactacccgcgtaac
gtacagccgattggttttgacttagtgccttattctaaaaaacaaaaaggtgaccgatca
cgtaaattagatgatcgttacttatttttagaggcgctactcagtgcccgcgataactta
tacatgagttacattggtcgctcgtgttttgacaaccagccgcgcatgccatcaaccctt
gtgagcgagttgctagaatatattgggcgtagctttgcattaagcgacgacagcgaaaaa
acactgccagagtgtttaattagccaacagcatttacagccctttaatagccattattat
ttagccaatgagcaagcaaacactgtgctgagcaaccacagctataatccaatttggctg
ccaagtgagtcaataaccccacaagtcgtgagcgcgcttaatgcaacaccgcctgagcag
ttagagctcgatgtgtttattcgcagtgtttgcaacgcccaagagagtttttatcaacaa
agtttaggattgcgattaccgcaatttaacgaagtagtaaaagacgaagagccctttagc
ctagacgcattgcgccgctatttttaccttgatgaaatactcgaagccaacattaacgag
ctgccacttagtacagaacaaatattgcaacgcggcgaactaccacaagccaacgtaggt
agcttaatatttgagagcatgcagcaccgagtagacgcattggcagggcaagtgaaagag
caaattaaagggggcaaaagcgaccctatagaggtagccctcgaactagaaaacactaaa
atagaaggctggttaaaccatatttatttgcaaaaacaagtgttttatcgcagcgctagt
ataaaagcgaaagatttaattaaaggctttatttatcacctagtagcgcaaagtatggag
caacaagtagaaacgctaatacttgggcttgataaacaagttacctttgcgccaataagt
aaaaccgatgccgatgcattgttagttgattggtttgagttatacaaagcactgcgcaac
gagcccgtggcgttttttccggtaagtggctacgagtacgtaaaaagcggcggcgatata
gcaaaagccatgagtaaatttagcccgcaatacatagggcgaggcgagggcgaaaacccc
tatattcgcttaacggtacaatcgcttaacgattgccaagacgagtttatacagtggagc
gataaattactcgccccgttatttgcacacgctaaggagagtgaccatgcaagcgcttaa
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