Pseudoalteromonas translucida TAC125: PSHAa1963
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Entry
PSHAa1963 CDS
T00282
Symbol
dnaQ
Name
(GenBank) DNA polymerase III: epsilon subunit, 3-5 exonucleolytic proofreading function
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
pha
Pseudoalteromonas translucida TAC125
Pathway
pha03030
DNA replication
pha03430
Mismatch repair
pha03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pha00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PSHAa1963 (dnaQ)
03430 Mismatch repair
PSHAa1963 (dnaQ)
03440 Homologous recombination
PSHAa1963 (dnaQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pha03032
]
PSHAa1963 (dnaQ)
03400 DNA repair and recombination proteins [BR:
pha03400
]
PSHAa1963 (dnaQ)
Enzymes [BR:
pha01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PSHAa1963 (dnaQ)
DNA replication proteins [BR:
pha03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PSHAa1963 (dnaQ)
DNA repair and recombination proteins [BR:
pha03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PSHAa1963 (dnaQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
DNA_pol_A_exo1
vATP-synt_AC39
Motif
Other DBs
NCBI-ProteinID:
CAI87020
UniProt:
Q3IIS2
LinkDB
All DBs
Position
I:complement(2067731..2068444)
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AA seq
237 aa
AA seq
DB search
MARRQIVLDTETTGIDPKQGHRIIEIGCVELVNRRLTGNNFHVYINPQRNSEEEAIDVHG
ITNEFLRDKPLFHQIAQEFFDYIKGAELVIHNAPFDIGHMDNEFSLLNQGYPKTATFCQV
LDTLKMARDLHPGQKNNLDALCRRYDVDNAKRTLHGALLDSEILADVYLAMTGGQVKLNL
NQNKNDDTDQQKGGIRRLSAQRAPLVVLSASEAEQAAHEARLDIVNNEGGHCIWRAD
NT seq
714 nt
NT seq
+upstream
nt +downstream
nt
atggcacgcagacaaatagttttagatacagaaaccaccggcatcgaccctaaacaaggg
catcgtattatcgaaatagggtgtgttgaattagtaaatcgccgcttaaccggcaataac
tttcatgtgtatattaacccgcagcgcaacagtgaagaagaagcaatagacgttcacggt
atcactaatgagtttttacgtgataaaccattgtttcatcaaattgctcaagagtttttt
gattatattaagggtgcagaactggttattcataatgcgccgttcgatattggccatatg
gataatgaattttctctgcttaaccagggctatcctaaaacggccactttctgtcaagta
ctcgacacgcttaaaatggcgcgtgacttgcatccaggacaaaagaacaacctagatgcg
ttatgccgtcgttacgacgtagataacgctaagcgaaccttgcacggcgcattactggat
tctgaaatattagctgacgtttacctagcaatgactggcggacaagttaagctaaatttg
aatcaaaataaaaatgacgataccgatcagcaaaaaggcggaatacgacgcttaagcgcc
caaagagcacctcttgtagtattaagcgccagtgaggcagaacaagctgcacacgaagca
cgattagatattgttaataatgaaggcggccactgtatatggcgcgctgattaa
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