KEGG   Pseudoalteromonas translucida TAC125: PSHAa2059
Entry
PSHAa2059         CDS       T00282                                 
Symbol
hupB
Name
(GenBank) DNA-binding protein HU-beta (NS1) (HU-1)
  KO
K03530  DNA-binding protein HU-beta
Organism
pha  Pseudoalteromonas translucida TAC125
Brite
KEGG Orthology (KO) [BR:pha00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pha03032]
    PSHAa2059 (hupB)
   03036 Chromosome and associated proteins [BR:pha03036]
    PSHAa2059 (hupB)
   03400 DNA repair and recombination proteins [BR:pha03400]
    PSHAa2059 (hupB)
DNA replication proteins [BR:pha03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    PSHAa2059 (hupB)
Chromosome and associated proteins [BR:pha03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    PSHAa2059 (hupB)
DNA repair and recombination proteins [BR:pha03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      PSHAa2059 (hupB)
SSDB
Motif
Pfam: Bac_DNA_binding HU-HIG HU-CCDC81_bac_2 HU-CCDC81_euk_1 HU-CCDC81_euk_2 HU-DNA_bdg Arteri_nsp7a
Other DBs
NCBI-ProteinID: CAI87115
UniProt: Q3IF56
LinkDB
Position
I:complement(2176431..2176703)
AA seq 90 aa
MNKSQLIDQIAADADISKAAAGRALDSFIESVTGALKEGDSVALVGFGTFSVRDRAARSG
RNPQTGETIQIAAATIPAFKAGKALKDAVN
NT seq 273 nt   +upstreamnt  +downstreamnt
gtgaataaatctcaattaatcgatcaaatcgcagctgatgctgacatttctaaagcggct
gcaggtcgtgcactagattcatttatcgaatcagttactggcgcacttaaagaaggcgac
tcagttgcacttgttggttttggtactttttcagttcgtgaccgtgctgcacgttcaggc
cgtaacccacaaactggcgaaacaattcaaattgctgctgcaactatccctgcatttaaa
gcaggtaaagcactaaaagacgcagtaaactaa

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