Pseudoalteromonas translucida TAC125: PSHAa2424
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Entry
PSHAa2424 CDS
T00282
Symbol
holC
Name
(GenBank) DNA polymerase III, chi subunit
KO
K02339
DNA polymerase III subunit chi [EC:
2.7.7.7
]
Organism
pha
Pseudoalteromonas translucida TAC125
Pathway
pha03030
DNA replication
pha03430
Mismatch repair
pha03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pha00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PSHAa2424 (holC)
03430 Mismatch repair
PSHAa2424 (holC)
03440 Homologous recombination
PSHAa2424 (holC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pha03032
]
PSHAa2424 (holC)
03400 DNA repair and recombination proteins [BR:
pha03400
]
PSHAa2424 (holC)
Enzymes [BR:
pha01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PSHAa2424 (holC)
DNA replication proteins [BR:
pha03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PSHAa2424 (holC)
DNA repair and recombination proteins [BR:
pha03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PSHAa2424 (holC)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_chi
Motif
Other DBs
NCBI-ProteinID:
CAI87473
UniProt:
Q3II74
LinkDB
All DBs
Position
I:2574827..2575273
Genome browser
AA seq
148 aa
AA seq
DB search
MNMNAQFFVLKQQDESLAKPDDHLALAAQIAADQYRLGQRVFICVDNENTAFAIDETLWA
FDPDSFVPHNLQGEGPKGGAPVEIGTTPPVGNRKVLINLANNLPDFIRRFNQVFDFVPVE
AVAKQAARERFKKLRQLGANITTQDINN
NT seq
447 nt
NT seq
+upstream
nt +downstream
nt
atgaacatgaacgcccaatttttcgttctaaagcaacaagatgagtcgctggctaagcct
gatgatcatttggctttggcggctcaaattgccgctgatcagtatcggcttggccaacgt
gtatttatttgtgtagataacgaaaataccgcctttgccattgatgaaacactttgggca
tttgatcccgacagttttgtacctcataacctacaaggtgaaggcccaaaaggcggcgca
ccggtagaaattggtactacgccccctgttggcaatcgtaaagttttaattaacttggct
aataacttaccggattttattcgccgctttaaccaagtttttgattttgtacccgtagaa
gccgttgctaaacaagcagctcgcgagcgttttaaaaagctacgccaactcggtgctaac
atcaccacgcaagatattaataactaa
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