Pseudoalteromonas translucida TAC125: PSHAa2701
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Entry
PSHAa2701 CDS
T00282
Name
(GenBank) protein with EAL domain
KO
K18765
RNase E specificity factor CsrD
Organism
pha
Pseudoalteromonas translucida TAC125
Brite
KEGG Orthology (KO) [BR:
pha00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pha03019
]
PSHAa2701
Messenger RNA biogenesis [BR:
pha03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
PSHAa2701
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAL
HCV_NS5a
Motif
Other DBs
NCBI-ProteinID:
CAI87749
UniProt:
Q3IFJ7
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All DBs
Position
I:complement(2857881..2859239)
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AA seq
452 aa
AA seq
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MQKGKLKFINRFKAHLVVLLNLIILAATRWVAHLATRVASLKSKFNVKHKVEAETAPTNT
LGNDRLLSESSTAAAYNIFALIECHCHFDPSTDLEASFKILLAKNLPALNYISVKLLSAG
NLAVTIKHIPIIKLELYIECLNFCALTICKKHQKHLTAKNVKIGLCNYRASANQTVVYQQ
AKSALTLSQQSPLQHCHRLGISHSRVNIFSNNQIIKSIKKNKFVIYFQPLFELDSGRILQ
HEVLIRVRGGANELLLANAGINQLDNDQDAFLFDQAIIIKVKKLLLADTSAAIISISLHP
KNWFNKAFWQWLITQVSDFKIEHKLQFEINAADFFKYQIRLQGVLKIITKLNYQIIIDGI
KSSDHIIQLVNYPQVLGVKLAYDLVHSIEASAHQQSCVKNIVNACQLLNIAVFASDVETK
QELQMLTILGVDAAQGFYFTQLLPDFTQTVFH
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaagggtaagcttaagtttattaaccgctttaaggctcatcttgttgtgttgcta
aatttaattatattagcggcaactcgctgggttgctcatttagcaacccgagtagcgtca
ttgaaatcaaagtttaatgtaaagcataaagtagaggcagaaacagcgcctactaatact
ttaggtaatgatcgccttttaagtgagagtagtacggcagcagcttataatatatttgcc
ctgatcgagtgtcattgtcattttgatcccagtactgatctagaagctagttttaaaatt
ctacttgcaaaaaacttacctgcgttaaactatatttcagttaaattattaagtgcgggt
aacttagcggtaaccataaagcatattccaatcattaagttagagctgtacattgagtgc
ttaaatttttgtgcactaacaatatgtaaaaagcatcaaaaacacttaacggcaaaaaat
gtaaaaataggcctgtgtaattacagagcaagtgctaatcaaacagtggtttatcaacaa
gcaaaatctgcgttaactttatcgcagcaaagcccattacagcattgtcatcgcttggga
ataagccatagccgagtaaatatattttcgaataaccaaataataaaaagcattaaaaaa
aataagtttgtaatttattttcagcctttatttgagctcgatagtgggcgtattttgcaa
catgaagtgttgattagagtacgcggtggcgctaatgagttactgctagctaatgctggc
attaatcagctagataatgatcaagacgcatttttatttgatcaagcaattatcatcaaa
gttaaaaagctattactagcagatacttcagccgcaattattagcattagcttacatcct
aaaaattggtttaacaaagcgttttggcaatggctaataacgcaagtaagcgattttaaa
atagagcataaactacaatttgaaataaatgcagcagacttttttaaatatcaaatacgt
ttacaaggcgtattaaaaataataactaagctaaattatcagattattattgatggtatt
aaaagtagcgaccatattattcaactggttaattatccacaagttttaggagttaaatta
gcctacgacttagtgcactcaatagaggcaagcgcgcatcaacaaagttgtgtaaaaaac
attgtaaatgcgtgccagttattaaatatagcggtatttgctagtgacgtagaaaccaaa
caagagctacaaatgcttactattttaggggtagatgccgcgcaggggttttattttacg
cagttgttgcctgattttacacaaaccgtatttcattaa
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