Pseudoalteromonas translucida TAC125: PSHAa2806
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Entry
PSHAa2806 CDS
T00282
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase alpha chain (RNAP alpha subunit) (Transcriptase alpha chain) (RNA polymerase alpha subunit)
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
pha
Pseudoalteromonas translucida TAC125
Pathway
pha03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pha00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
PSHAa2806 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pha03021
]
PSHAa2806 (rpoA)
03400 DNA repair and recombination proteins [BR:
pha03400
]
PSHAa2806 (rpoA)
Enzymes [BR:
pha01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
PSHAa2806 (rpoA)
Transcription machinery [BR:
pha03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
PSHAa2806 (rpoA)
DNA repair and recombination proteins [BR:
pha03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
PSHAa2806 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
Motif
Other DBs
NCBI-ProteinID:
CAI87843
UniProt:
Q3IJI6
LinkDB
All DBs
Position
I:complement(2985382..2986368)
Genome browser
AA seq
328 aa
AA seq
DB search
MQGSVTEFLKPRLVDIDAINPTRSKIVLEPLERGFGHTLGNALRRILLSSMPGCAVTEVE
IDGVLHEYSAKEGVQEDIIEILLNLKGLAVTLEGKDEVFLTLAKSGVGPVTASDIQHDGD
VTIANPDHVICNLTTNNSEISMRIRVERGRGYVPASSRLSSDDDERPIGRLLLDASFSPV
ERIAYSVESARVEQRTDLDKLIIDMETNGTLDPEEAIRRASTILAEQLDAFVDLRDVTEP
EEKEEKPEFDPILLRPVDDLELTVRSANCLKAEQIQYIGDLVQRTEVELLKTPNLGKKSL
TEIKDVLASRGLSLGMRLENWPPASLAE
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgcagggttctgttacagaatttctaaaaccaaggttagtcgatatcgacgctatcaac
ccaacacgttctaaaatagttttagaaccacttgagcgtggcttcggtcacactttgggt
aatgccttacgccgtatactgctttcatctatgcctggatgtgcagtaactgaagttgaa
atcgacggtgtattgcatgagtacagcgcgaaagaaggcgttcaagaagacatcattgaa
atactattaaacctaaaaggtttagcagtaacgttagaaggcaaagatgaagtttttctg
accctggctaaatctggtgtaggccctgtgactgcgtcagatattcagcacgatggcgat
gtaacaattgctaacccagatcatgttatttgtaatttaacaacaaataacagcgagatc
agcatgcgtattcgtgttgaacgtggtcgtggttatgtgccggcatctagtcgtttatcc
tctgatgacgatgagcgtccaattggtagattgttgcttgatgcatcatttagcccagtt
gaacgtattgcgtactcggttgaatcagctcgagttgagcaacgtacagatttagacaag
ttaatcattgatatggaaacaaacggcactttagatccagaagaagcgatccgccgcgcg
tctactatcttagctgagcaattagatgcattcgtagatttacgtgatgtaactgagcca
gaagagaaagaagagaagccagaattcgatcctattctacttcgtccagttgatgatctt
gaactaacagtacgctcagcaaattgtttgaaagccgagcaaattcaatatatcggtgat
ttagttcagcgcactgaagttgagcttcttaaaacgcctaatttaggtaagaagtctcta
actgaaattaaagacgtgctagcttcacgtggactttctctaggcatgcgcctagaaaat
tggccacctgcaagtttagctgaataa
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