Pseudoalteromonas translucida TAC125: PSHAa3021
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Entry
PSHAa3021 CDS
T00282
Symbol
mnmE
Name
(GenBank) enzyme adding cmnm(5) to tRNA-s(2)U34, forming (with subsequent MnmG action) cmnm(5)s(2)U34-tRNA, an intermediate in mnm(5)s(2)U34-tRNA synthesis
KO
K03650
tRNA modification GTPase [EC:3.6.-.-]
Organism
pha
Pseudoalteromonas translucida TAC125
Brite
KEGG Orthology (KO) [BR:
pha00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pha03016
]
PSHAa3021 (mnmE)
Transfer RNA biogenesis [BR:
pha03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
PSHAa3021 (mnmE)
Prokaryotic type
Methyltransferases
PSHAa3021 (mnmE)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MnmE_helical
TrmE_N
MMR_HSR1
FeoB_N
RsgA_GTPase
Dynamin_N
ABC_tran
AIG1
AAA_28
Ras
NACHT
Arf
AAA_29
Motif
Other DBs
NCBI-ProteinID:
CAI88050
UniProt:
Q3IK56
LinkDB
All DBs
Position
I:complement(3210475..3211839)
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AA seq
454 aa
AA seq
DB search
MINQDTIAAQATAPGRGGVGIIRVSGSLAKSVAEKVVGKIPKVRYADYVPFKSLAGEQLD
QGIAIYFAGPNSFTGEDVLELQGHGGPVVLDMLLKEISKIEGVRLAKPGEFSERAFMNDK
LDLTQAEAIADLINATSEQAAKSALQSLQGEFSKHIETLVEKVIHLRMYVEAAIDFPDEE
IDFLSDGKVSGDLDAIIAQLNTVTDQAKQGSIMREGMRVVIAGRPNAGKSSLLNALAGRE
AAIVTEIAGTTRDVLREHIHIDGMPLHIIDTAGLRESPDLVEQIGIERAWDEINQADRVL
FMLDGTDTIDTDPHKIWPEFMAKLPVGLGVTVIRNKADLSGDVVGMDQNQQYPVISLSAK
NADGIELVREHLKACIGFDGATEGGFMARRRHLDALEHAAYHLDTGKAQLEMHIAGEILA
EELRLTQQYLNEITGEFTSDDLLGKIFSSFCIGK
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atgatcaatcaagacacaattgcagcacaagcaacagcccccggacgtggtggtgttggt
attattcgcgtttcaggcagccttgctaaaagtgttgccgaaaaagtagtaggtaaaata
cctaaagttcgctacgccgattatgtgccatttaaaagccttgctggcgagcaacttgat
caaggtattgccatttactttgccggccctaactcattcactggtgaagatgtacttgaa
ctacaaggccacggcggtcctgtagtactggatatgttacttaaagaaattagtaaaata
gagggcgttcgtttagcaaagcctggggagttttctgaacgtgcatttatgaatgacaag
cttgatttaacacaagcagaagccatcgccgatttaattaatgcaacctcagagcaagcc
gctaaaagtgccctacagtctctccaaggtgaattttctaagcacatagaaacacttgta
gaaaaagtaattcacttgcgtatgtacgtagaagccgcaattgattttcccgatgaagaa
atcgattttttatctgacggtaaagtttctggcgatttagatgccattattgcccagctc
aatacggtaaccgatcaagctaagcaaggcagcataatgcgcgaaggtatgcgggttgtt
attgccggtcgccctaatgcgggtaaatcaagcttattaaatgcccttgctgggcgagaa
gccgctattgtaaccgaaattgccggcactacacgtgacgtactacgtgaacatatacat
atagatggcatgccactgcatattatagacacagcaggtctgcgtgaaagccctgattta
gtagaacaaataggtattgagcgcgcatgggatgaaataaaccaagccgaccgagtgctg
tttatgcttgatggaaccgacactattgatactgatccccataaaatttggccagaattt
atggctaaattacccgttggattaggggttacagtgattagaaataaagccgatttatcg
ggcgatgttgttggtatggatcaaaatcagcaatacccggtcatcagtttaagtgctaaa
aatgccgatggtattgagctggttcgcgagcatttaaaagcctgtattggttttgatggt
gcaacagaaggcggctttatggcacgtcgtcgccaccttgatgcgcttgagcatgcagcg
taccacttagatacaggtaaagctcagttagaaatgcatatagcgggcgaaatactcgcc
gaagaattgcgtttaacccagcaatatctaaacgaaattaccggtgaattcacctcagat
gacctacttggaaaaatatttagctcgttttgtattggtaaataa
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