Pseudoalteromonas translucida TAC125: PSHAb0478
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Entry
PSHAb0478 CDS
T00282
Symbol
gntR
Name
(GenBank) putative transcriptional repressor for gluconate/idonate utilization (GalR/LacI familiy)
KO
K06145
LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor
Organism
pha
Pseudoalteromonas translucida TAC125
Brite
KEGG Orthology (KO) [BR:
pha00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pha03000
]
PSHAb0478 (gntR)
Transcription factors [BR:
pha03000
]
Prokaryotic type
Helix-turn-helix
LacI family
PSHAb0478 (gntR)
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Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_1
Peripla_BP_3
Peripla_BP_4
LacI
Motif
Other DBs
NCBI-ProteinID:
CAI89515
UniProt:
Q3ICD9
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All DBs
Position
II:539655..540605
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AA seq
316 aa
AA seq
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MTVSRYLRNPEKVSATTQIKIKAAIDSLGYIANKAPDLLSNAKSYSIGVLVPSLTNQVFS
QVIRGIEDITEPAGYQTMLAHYGYSPEIEEKRVEYLLSYHVDGLILSETTHTDRTRKMIA
MAGIPVVEIMDIHHTPIHQAVGFDNAKAAFEMTNALLNKGYRNIVYLGARLDMRTQLKFQ
GYSDAMLLRGLTPKSVMTNEASSFSLGAKLLQKTRTEHPDTDCIFCTNDDLAIGAIFECQ
RNNISVPQHMGVVGFHGHDIGQSMVPQLASVITPRYQIGNLAGAKLLSRISSTADIEIPD
EQICDTGYVIHLGESV
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
atgacggtaagtcgttatttacgtaacccagagaaagtatcagcaacaactcaaatcaaa
attaaagcagccatagattcacttggttatattgctaataaagccccagatttattatct
aatgccaaaagctactctataggtgtgcttgtcccatcgttaactaatcaagtgttttcg
caagttattcgcggaattgaagatattactgagcctgctgggtatcaaacaatgctcgcg
cattatggctatagccccgaaattgaagaaaagagagttgaatatttattatcatatcat
gtagatgggctaattttatcggaaacaacgcataccgacagaacccgaaaaatgattgct
atggcgggtattcctgtggttgaaataatggatattcatcacactccaatacaccaagcg
gttggttttgataacgctaaagctgcttttgagatgaccaatgcgcttttaaataaaggc
taccggaatattgtttaccttggtgcaaggttagatatgcgcacacaattgaagtttcaa
ggctatagcgacgcaatgttactaagggggcttactcctaaaagtgtgatgacaaatgaa
gcttcgtcgtttagtttgggcgctaaattattgcaaaaaacacgtactgaacacccagat
actgactgtatattttgtactaatgatgatttggctattggtgctatttttgagtgtcaa
agaaataatatttctgttcctcaacacatgggggttgtaggctttcatggccatgatatt
ggtcaatctatggtgcctcagctagccagtgtgatcacgccgcgttatcagattggtaat
cttgcgggggctaaattactcagtcgtattagttcaacagcagatattgaaatacccgat
gagcaaatatgtgataccggttatgtgattcatttaggtgaaagtgtttga
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