Phaeobacter sp. G2: N1037_02005
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Entry
N1037_02005 CDS
T10616
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
phae Phaeobacter sp. G2
Pathway
phae03030
DNA replication
phae03410
Base excision repair
phae03420
Nucleotide excision repair
phae03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
phae00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
N1037_02005 (polA)
03410 Base excision repair
N1037_02005 (polA)
03420 Nucleotide excision repair
N1037_02005 (polA)
03440 Homologous recombination
N1037_02005 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
phae03032
]
N1037_02005 (polA)
03400 DNA repair and recombination proteins [BR:
phae03400
]
N1037_02005 (polA)
Enzymes [BR:
phae01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
N1037_02005 (polA)
DNA replication proteins [BR:
phae03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
N1037_02005 (polA)
DNA repair and recombination proteins [BR:
phae03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
N1037_02005 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
N1037_02005 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
Taq-exonuc
HHH_5
Motif
Other DBs
NCBI-ProteinID:
UWS79817
LinkDB
All DBs
Position
complement(424360..427182)
Genome browser
AA seq
940 aa
AA seq
DB search
MSESTLGQAKFGKGCHLHLIDGSAFIFRAYHALPPLTRKSDGLPIGAVAGFCNMLHRYVE
ANTGPDAPTHVAVIFDHSGKSFRNDMYDLYKANRPPAPEDLRPQFPLTRDATRAFNIACK
EVEGFEADDIIATLAHQARDAGGRCTIISSDKDLMQLVGGGVEMLDAMKNKRIDSDGVVE
KFGVGPDRVVDVQALAGDSVDNVPGAPGIGIKTAALLINEYGSLEELLDRAEEIKQPKRR
QTLIDNRAQIEMSKQLVQLDCTMELDFSLEDLEVLEPDAEVLMEFLGLMEFRTLAKRMAE
QMGIDAPALPEASAAGATAATEVAAAVAFDAEKYECLGDVAGLQGWIDRIYERGYVAVDT
ETTGLDAMVVDLVGVSLCVDPGEACYIPLAHKQGGDDLFGGEGLAEGQMPLEQALAMLKP
MLEDPAVLKIGQNMKYDAKILHRYGIDVAPIDDTMLMSYALHAGEHNHGMDILSERYLDH
KPIPIKPLLGTGKSAITFDRVPMADAVPYAAEDADITLRLWQHFKPELHQRQVTTVYETL
ERPLVPVLAEMERNGIKVDRDTLSRMSNAFAQKMAGLEDEIHSLAGQSFNVGSPKQLGEI
LFDKLELPGGKKGKTGAYATGADILEDLATEHALPALVLDWRQLSKLKSTYTDALQDHIN
PDTGRVHTSYIQTGANTGRMASSDPNLQNIPVRSEEGRRIREAFVAEEGNVLLSLDYSQI
ELRILAHVAGIDALKAAFAAGQDIHAMTASEMFNVPMEEMTSEIRRQAKAINFGVIYGIS
GFGLARNLRIPRAEAQGFIDRYFERFPGIRAYMDQTVEFAKEHGYVQTLFGRKIHTPEIA
AKGPRAGFAKRAAINAPIQGTAADVIRRAMVRMPQAIAHLPARMLLQVHDELLFEVPQAA
VEETIETARQVMENAADPAVHLDVKLSVDAGQGSNWAEAH
NT seq
2823 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaaagtacacttggccaggccaaattcggcaaaggatgccatctgcatttgatt
gatggctctgcctttatctttcgggcctatcacgcgctgccgccgctgacgcgcaaatca
gatgggctgcccatcggcgccgttgccggcttttgcaacatgctgcaccgctatgtcgag
gccaacaccggcccggatgcccccacccatgtggcggtgatctttgatcattccggcaaa
agcttccgtaatgacatgtatgatctctacaaggccaaccgcccgccggcgcccgaggat
ctgcgcccccagttcccgctgacccgcgatgccacccgcgccttcaatatcgcctgcaaa
gaggtcgaaggctttgaggccgacgatatcatcgccacccttgcccatcaggcgcgtgat
gctggcgggcgctgcaccatcatttcgtcagacaaggatctgatgcagctggtgggcggc
ggcgttgaaatgctggacgcgatgaaaaacaagcgcatcgacagcgatggcgtggtagag
aaatttggcgttggccccgaccgggtggtggatgtgcaggcgctggccggcgatagcgtc
gacaatgtgcccggcgcccccggcattggcatcaagaccgcggcgcttttgatcaacgaa
tatggctcgctcgaagaattgctggaccgcgccgaagagatcaaacagcccaagcgtcgc
cagaccctgatcgataaccgcgcgcagatcgagatgtccaaacagctggtgcagctggat
tgcacaatggagctggatttctccctcgaagacctagaggtgctggaacccgatgccgag
gtgttgatggaattcctgggactgatggaattccgcaccctggccaaacgcatggcggaa
cagatggggattgacgcccccgccctccccgaagccagtgctgcaggcgccactgccgcg
accgaagtcgccgcagccgtggcctttgatgctgaaaaatatgaatgccttggcgacgtg
gctgggctgcagggctggatcgaccggatctatgagcgcggctatgtggcggtggatacc
gaaaccaccgggctggatgccatggtggtggatctggttggggtgtcgctctgcgttgat
cctggcgaggcctgctatattccgctggcccataaacagggcggcgatgatctctttggc
ggtgagggccttgccgaggggcagatgccgctggagcaggcgctggccatgctcaagccg
atgctggaggaccctgcggtgctcaagatcggccagaacatgaaatatgacgccaagatc
ctgcaccgctatggcattgatgtggccccgattgatgacaccatgctgatgtcctatgcg
ctgcacgccggcgaacataaccatggtatggatatcctgtcggagcgttatctcgatcac
aaaccgatcccgatcaaaccgctgctgggcacggggaaatccgccatcacctttgaccgg
gtgcccatggccgatgcagtgccctatgccgccgaagacgccgatatcaccctgcgcctg
tggcaacatttcaaaccggaactgcaccagcggcaggtgaccaccgtctatgaaaccctg
gaacgaccgctggtgccggtgctggccgagatggagcgcaacggcatcaaggtggaccgc
gacacgctgagccgcatgtccaacgcctttgcccagaaaatggccgggctggaggatgag
atccacagcctggcgggccagtctttcaacgtcggttcccccaaacagctgggtgagatc
ctgtttgacaagctggagctgcccggcggcaaaaagggcaagaccggcgcctatgcaacc
ggcgccgatatcctcgaggatctggccaccgaacacgcgctgcccgctctggtgctggac
tggcgccagctgagcaagctgaaatccacctatacggacgcgctgcaggaccatatcaac
ccggatactggccgggtgcatacctcctatatccagaccggggccaacaccggccgcatg
gcctcctctgatccgaacctgcagaatattcctgtgcgctccgaggaaggccgtcgcatc
cgcgaggcctttgtcgcagaagagggcaatgtgctcttgtcgctcgactatagccagatc
gagctgcgcattctggcccatgtggccgggattgacgcgctgaaagccgcctttgctgcc
ggtcaggatattcacgccatgaccgcgtcggaaatgttcaacgtaccgatggaagagatg
acctcggagattcgccgccaggccaaggcaatcaactttggcgtcatctacggcatctcc
ggctttggcctcgcccgcaatctgcgcatcccccgggccgaggcccagggctttatcgac
cgctactttgaacgcttccccggcatccgcgcctatatggatcagacggtggagtttgcc
aaagagcacggctatgtgcagacgctgtttggccgcaagatccacacgccagagatcgcc
gccaaaggcccacgcgccgggtttgccaaacgcgccgccatcaatgctccgatccagggt
accgccgccgatgtgatccgccgcgccatggtccgcatgccacaggccatcgcccatctg
cccgcccggatgttgttgcaggtccatgatgaactgctgttcgaagtgccgcaggctgcg
gttgaagagaccatcgaaacggcccgccaagtgatggaaaatgccgcagacccagccgtg
catctggacgtgaaactcagcgtcgacgcaggtcagggcagcaactgggctgaagcgcat
taa
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