Phaeobacter sp. G2: N1037_08910
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Entry
N1037_08910 CDS
T10616
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
phae Phaeobacter sp. G2
Pathway
phae03420
Nucleotide excision repair
phae03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
phae00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
N1037_08910
03430 Mismatch repair
N1037_08910
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
phae03400
]
N1037_08910
Enzymes [BR:
phae01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
N1037_08910
DNA repair and recombination proteins [BR:
phae03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
N1037_08910
MMR (mismatch excision repair)
Other MMR factors
N1037_08910
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
AAA_30
UvrD_C_2
PcrA_UvrD_tudor
AAA_11
DUF3553
DEAD
Motif
Other DBs
NCBI-ProteinID:
UWS81112
LinkDB
All DBs
Position
1858349..1860835
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AA seq
828 aa
AA seq
DB search
MSTFDEMDAFDGASLSSRAMAARPTPYLDGLNPAQREAVECLDGPVLMLAGAGTGKTKAL
TARIVHLLNTGSARTNEILAVTFTNKAAREMKERVGAMLGQPAEGMPWLGTFHSVCVKLL
RRHAELICGEAGVGPDEARDSESPNPYEDLGPSAVRSRHRTVHLKSNFTILDTDDQIRLL
KQLIRAAGIDEKRWPPRMLAGIIDDWKNRALTPDKLPASEAGAYNHRGPELYAQYQRRLL
ELNAVDFGDLLLHVVTIFQTHSDILAQYQRWFRYIMVDEYQDTNIAQYMWLRLLAGGHKN
ICCVGDDDQSIYGWRGAEVGNILRFEKDFPGAKVVRLEQNYRSTEHILAAASGVISANAG
RLGKELWTAAKGGEKVRLIGHWDGEEEARWIGEEIEATQRGTRGQRPIGLNDMAILVRAS
HQMRAFEDRFLTIGLPYRVIGGPRFYERLEIRDAMGYFRMVTSADDDLAFERIVNTPKRG
LGDKAQQTIQSFARENGVSLVEGARLAVEAGAIKGKGGAALRRLVEDLARWGRMTGDADI
SHMELAEIVLDESGYTGMWQADKNPDSPGRLENLKELVKALENFENLQGFLEHVSLVMDN
DKQDSDQKVSIMTLHAAKGLEFPAVFLPGWEDGLFPSQRSMDESGLKGLEEERRLAYVGI
TRAEEVCTISFAGNRRVFGQWQSQLPSRFVDELPEEHVEVLTPPGLYGGGYGAAASSDEP
VRSTIEAKVAQADGYNSPGWKRMQARAGQRGNSQPKQAGSPIIDLTATASFTLGERVFHQ
KFGYGAIAGIEGDKLEVNFEKAGTKKVVARFISASGAGAETAQDDVPF
NT seq
2487 nt
NT seq
+upstream
nt +downstream
nt
atgagcacatttgatgaaatggacgcctttgacggcgcctccctgtcgtcgcgggccatg
gcggcccgccccaccccctatcttgacgggctgaacccagcccagcgagaggcagtggaa
tgtctggatggtccggtcctgatgctggccggggccgggaccggcaagaccaaggcgctg
acggcgcggattgtgcatctgctcaacaccggttcggcgcgcaccaatgaaattctggcg
gtgacctttaccaacaaggccgcccgcgaaatgaaagagcgggtcggggcgatgctgggc
cagccggccgagggcatgccctggcttggcaccttccattcggtctgcgtcaagctgctg
cgccgtcacgccgagttaatctgcggtgaggctggggtcggccctgatgaggccagagac
tcagagtccccgaacccctatgaggatttgggtccatcggcggtacggagtcggcacagg
accgtgcatctaaagtcaaacttcaccattctggatacggatgatcagattcgcttgctc
aaacagctgatccgcgccgcaggaatagatgaaaagcgctggccgccacggatgctggcg
gggatcattgacgactggaaaaaccgggcgctgacaccggataaactgcccgcgtctgag
gcaggggcctataaccatcgtgggccagagctatatgcccagtatcagcgccgcctgctg
gagctgaacgccgtcgattttggcgatctgctgctgcatgtggtgacgattttccaaacc
cacagcgatattctggcgcagtatcagcgctggttccgctatatcatggtggacgaatac
caagataccaatatcgcgcaatatatgtggctgcggctgctggcaggcggtcacaaaaac
atctgctgtgtcggcgatgatgaccagtcaatctatggctggcgcggcgccgaggtgggc
aatatcctgcgctttgaaaaggacttccccggcgccaaagttgtccggctggagcaaaat
tatcgctcaaccgagcatatcctggcagccgcctccggcgtgatcagtgccaatgcgggc
cgcctgggcaaagagctgtggaccgccgccaagggcggtgaaaaggtccgactgattggc
cattgggacggcgaagaagaggcgcgctggattggcgaggaaatcgaggcgacacagcgc
ggcacgcgggggcagcgccctattgggttgaatgatatggccattctggtgcgggcctcg
catcagatgcgcgcctttgaggaccggtttctgaccatcgggttgccctaccgtgtcatc
ggcgggccgcgcttttacgagcggctcgaaattcgtgatgccatgggctatttccgcatg
gtgacctcggcggatgacgatctggcgtttgagcggattgtgaatacccccaaacgcggg
ctgggtgacaaagcgcagcaaaccatccagagctttgcccgcgaaaacggggtctccctg
gtggaaggcgcccgcctggctgttgaggcgggggcgatcaagggcaaggggggcgctgct
ctgcgtcggcttgttgaggatctggcccgctgggggcggatgaccggggacgcggatatc
tctcatatggaattggcggaaatcgtgctggatgagagtggctataccggcatgtggcag
gcggacaaaaaccctgacagcccaggacggcttgaaaacctcaaggagctggtcaaagcg
ctggagaactttgagaaccttcaggggtttttggaacatgtcagcctggtgatggacaat
gacaagcaggattcggaccagaaggtctccatcatgacgctgcatgcggccaaggggctg
gagtttccggcggtgtttctgccgggctgggaggatggcttgttcccctcgcagcggtca
atggacgaaagcggtctcaaaggtttggaggaagaacgccgccttgcctatgtgggcatc
acccgggccgaggaagtctgcaccatttcatttgcgggcaaccggcgtgtctttggccag
tggcaatcgcagctgccgtcgcgttttgttgatgagctgcccgaggagcatgtcgaggtg
ctgacgcctccggggctttatggcggcggttatggtgctgcggccagcagtgatgaacct
gtccgctcgaccattgaggccaaggtggcccaggccgatggctataactccccgggctgg
aagcgcatgcaggcgcgggctggccaaaggggaaactcacagccaaaacaagcgggtagc
ccgattattgacctgacggccaccgccagcttcacccttggagagcgggtgtttcatcag
aaatttggctatggagcgattgctggtatcgaaggggataagctggaagtgaattttgaa
aaggcgggcaccaaaaaggtggttgcgcgctttatttccgccagtggggcaggcgctgaa
accgcccaggacgatgtaccattttag
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