KEGG   Phaeobacter sp. G2: N1037_09460
Entry
N1037_09460       CDS       T10616                                 
Name
(GenBank) ribonuclease J
  KO
K12574  ribonuclease J [EC:3.1.-.-]
Organism
phae  Phaeobacter sp. G2
Pathway
phae03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:phae00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    N1037_09460
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:phae03019]
    N1037_09460
Messenger RNA biogenesis [BR:phae03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     N1037_09460
SSDB
Motif
Pfam: RNase_J_b_CASP RNase_J_C Lactamase_B Lactamase_B_2 RMMBL Anti-Pycsar_Apyc1 Lactamase_B_6
Other DBs
NCBI-ProteinID: UWS81215
LinkDB
Position
1984595..1986265
AA seq 556 aa
MSTDERLIYLPLGGAGEIGMNAYVYGYGKPGKERLILVDLGVAFPDMDSTPGVDLIMPDI
SWLRERVDQLEAIFITHGHEDHIGAVSHLYSQLNVPVYARAFTANLARRKMEERGHDPLV
VKTVGAWPEVTKLGPFTVGFAPMAHSIPESAGLVIDSPDGRVVHTGDFKLDRTPLVGEAF
DPEMWAEIAKPGIKALICDSTNVFSKTPGRSESDLPDEITRLIGEAKGMVAATTFASNVA
RVKTLADAGTRAGRSVVLLGRAMLRMVEAAKETGVLKNFPTVYSPEEAKDMPRNNLMLIT
TGSQGERRAASAQMARGKYRGLELKEGDLFLFSSKTIPGNERGVIRIINQFSERGVDVVD
DSSGLYHVSGHANGPDLEALHELLQPAMLVPMHGEHRHLRQHARLGEAKGIPSIVAVNGM
MLNLSGNRPSVLEYIDTGRTYLDGSIKIGAMDGVIRDRIRMALNGHLVVTLILDEEDEPL
GEPWCDIKGLTDNGSSNAALTEVLEEDLNQFLMRAGAKTLKDDDKLEGELRRIARQSCQN
EIGKKPEVTVVISRMR
NT seq 1671 nt   +upstreamnt  +downstreamnt
atgagcactgatgaacgactgatctaccttccccttggcggggcgggcgaaattggcatg
aatgcctatgtttacggctatggcaaacccggcaaagagcgactgatcctggtggatctg
ggcgttgctttcccggatatggacagcacccccggtgttgacctgatcatgcctgacatc
agctggctgcgcgagcgcgtcgaccagctggaagcgatttttatcacccatggtcacgaa
gaccatatcggggcggtatcgcatctctatagccagctgaacgtgccggtctatgcccgc
gccttcaccgccaatctggcccggcgcaagatggaagagcgtggtcatgacccgctggtg
gtgaaaaccgtcggtgcctggcccgaagtgactaaactgggtcccttcacggtgggcttt
gccccgatggcgcattcgatccccgaaagcgcaggtctggtgatcgatagccccgatggc
cgcgtagtgcatacaggcgacttcaaactggaccgcaccccactggtgggcgaagccttt
gatcctgagatgtgggctgagatcgccaaacctggcatcaaggcgctgatttgcgattcg
accaatgtgttctctaaaacaccgggtcgctcggaatctgatctgccagatgaaatcacc
cgcctgattggcgaggccaagggcatggtggccgccaccacctttgcctccaacgtggcg
cgggtaaagaccctggcagatgccggtactcgggccggacgttcggttgtgctgttgggg
cgggcgatgctgcgcatggtcgaagccgccaaggaaaccggcgttctgaagaatttccca
acggtctattcaccggaagaagccaaggatatgccgcgcaacaacctgatgctgatcacc
actggcagccagggcgaacgccgggccgcctcggcgcagatggcgcggggcaagtatcgc
gggctggagctgaaagagggcgatctcttcctgttctcctctaaaaccatccccggcaac
gagcgtggcgtgatccgcatcatcaaccagttctcggaacgtggcgtggatgttgtggac
gacagttcaggcctttaccacgtctctggccatgcaaatggtcctgatctggaagcgctg
catgagctgctgcaaccggcgatgctggtgcccatgcacggcgaacaccgccacctgcgt
cagcacgcacgcctgggcgaggccaagggcattcccagtatcgttgctgttaacggcatg
atgctgaacctgtcgggcaaccgtccctcggtgctggaatatatcgacaccggtagaacc
tatctggatggttcgatcaaaattggcgccatggacggtgtcattcgcgatcgtatccgc
atggctttgaacgggcatctggttgtcacgctgatccttgacgaagaggacgagcccctg
ggcgagccctggtgtgacatcaaggggctgacggacaatggcagctccaatgcggcgctg
acagaggtgctggaagaggatctgaaccagttcctgatgcgggctggggcaaagacgctg
aaagacgatgacaagctggaaggcgagctgcgccggatcgcccgtcagtcttgccagaat
gagatcggcaaaaaaccagaggtcaccgtggtgatcagccggatgcgttaa

DBGET integrated database retrieval system