KEGG   Phaeobacter sp. G2: N1037_09780
Entry
N1037_09780       CDS       T10616                                 
Name
(GenBank) sigma-54 dependent transcriptional regulator
  KO
K10126  two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD
Organism
phae  Phaeobacter sp. G2
Pathway
phae02020  Two-component system
Brite
KEGG Orthology (KO) [BR:phae00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    N1037_09780
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02022 Two-component system [BR:phae02022]
    N1037_09780
Two-component system [BR:phae02022]
 NtrC family
  DctB-DctD (C4-dicarboxylate transport)
   N1037_09780
SSDB
Motif
Pfam: Response_reg Sigma54_activ_2 Sigma54_activat AAA_lid_14 HTH_8 UPF0175 FleQ AAA_16 HTH_50 HTH_30 nSTAND_NTPase5
Other DBs
NCBI-ProteinID: UWS81272
LinkDB
Position
2051177..2052409
AA seq 410 aa
MTRKVLVVDDDAALREALAQTLELNDLEAITAGSFVVAKDLITAEFDGVILSDIRMPGRD
GFHLLDYVSGIDDDLPVILLTGEGDIPMAVKAMSRGAFGFLEKPCVTADLLTTLQRALKT
RHLVLENRDFKQQLEEGDPAARMLFGTSQQSDELRARVRAVAPTSAEVLVAGPAGSGISK
VAEVIHLMSPRAQAPFVKSPSAGLSTADLRELCQQAAGGSLFLDEISALSEALQYAVLDW
VEQGGETRLIAGSTADLAALVAAGSFGADLYYRLEGMRVRIPSLAERPGDIPVLFRLYVA
QAAEQAGIEAPQISQEHLAGLMAQDWPGNARSLMSAAMRFVLGMPDEISGATELGLAEQM
AQVERSLLIAALGRQNGRAAAAAEALKLPRKTFYDKLARYGIRPEDYRRA
NT seq 1233 nt   +upstreamnt  +downstreamnt
atgacccggaaggttctggttgttgatgacgatgccgccctgcgtgaggccttggcgcag
acgctggagctgaatgatctggaagccattactgcggggtcctttgtggtggcaaaggat
ttgatcactgccgagtttgacggggtaatcctgtccgatattcggatgccggggcgggat
gggtttcacctgctggactacgtgagcggcattgacgacgacctgccggtgatcctgttg
accggtgagggggatattcccatggcggtcaaggcgatgtcacggggggcctttggcttt
ctggaaaagccttgtgtcactgcggatctgctgacgacgctgcagcgggctttgaaaacc
cgccacttggtgctggagaaccgcgattttaaacaacagctggaagagggcgatccggcg
gcgcgcatgttgtttggcacctcccagcaatccgatgagctgcgagcgcgggtgcgcgct
gtagctccaacctcggccgaggttttggtggcggggccggccggcagcggcatttccaag
gtggcagaggtgatccacctgatgtcaccgcgcgcccaggcgccctttgtcaaatcgccc
tcggcagggctgagcaccgctgacctgcgggagctgtgtcagcaggccgctggtggatcg
ctgtttctggatgagatttctgccctctccgaagcgctgcaatatgcggtgctggactgg
gtcgaacaggggggcgagacacggctgattgcaggcagtaccgccgatctggcggcgctg
gttgcagcaggcagttttggcgcggatctatattaccggctcgaaggcatgcgggtgcgt
attccgtcactggccgagcgccctggtgatatcccggtgttgttcaggttgtatgtggct
caggccgcggaacaggccgggatcgaggcgccgcagatcagccaagaacatctggcgggg
ttgatggcgcaggattggccgggcaatgcgcgctcgctgatgtcggcagccatgcggttt
gttctggggatgccggatgagattagcggtgccaccgaactgggcctggcagagcaaatg
gcccaggtggaacgctcacttttgatcgcggctttgggacgtcagaatggcagggcagcc
gcagcggctgaggcgctgaaactgccgcgcaaaaccttttatgacaaactggcccgctat
ggcatccgcccagaggattatcgccgcgcctga

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