Phaeobacter sp. G2: N1037_18250
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Entry
N1037_18250 CDS
T10616
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
phae Phaeobacter sp. G2
Pathway
phae03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
phae00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
N1037_18250
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
phae03021
]
N1037_18250
03400 DNA repair and recombination proteins [BR:
phae03400
]
N1037_18250
Enzymes [BR:
phae01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
N1037_18250
Transcription machinery [BR:
phae03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
N1037_18250
DNA repair and recombination proteins [BR:
phae03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
N1037_18250
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
Glyco_hydro_65C
Motif
Other DBs
NCBI-ProteinID:
UWS79170
LinkDB
All DBs
Position
complement(3842877..3843893)
Genome browser
AA seq
338 aa
AA seq
DB search
MIHKNWAELIKPTQLEAKPGNDPARQATIIAEPLERGFGLTLGNALRRVLMSSLQGAAIT
SVQIDNVLHEFSSVAGVREDVTDIILNLKGVSLRMDVEGPKRLSINAKGPAVVTAGDISE
SAGIEVLNREHVICHLDDGADLFMELTVNTGKGYVSADKNKPEDAPIGLIPIDAIYSPVK
KVSYDVQPTREGQVLDYDKLTLKIETDGSVTPDDALAYAARILQDQLSIFVNFEEPESAN
RQDEDDGLEFNPLLLKKVDELELSVRSANCLKNDNIVYIGDLIQKTEAEMLRTPNFGRKS
LNEIKEVLSGMGLHLGMDVEDWPPDNIEDLAKKFEDTF
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atgatccataaaaattgggcagagctgatcaagccaacgcagcttgaagcaaagccgggc
aacgatcccgcacgtcaggcaacaattattgccgaaccgcttgagcgtggctttggcctg
acgcttggcaacgcgctgcgccgcgttctgatgagctcgctgcaaggtgccgcgatcaca
tccgtacagatcgacaacgttctgcacgaattctccagcgttgctggcgttcgtgaagat
gtcaccgatatcatcctgaatctcaagggtgtctccctgcgcatggacgtcgaaggcccc
aagcgcctgtcgatcaatgccaaaggcccagctgttgtcaccgccggtgacatctctgag
tccgcaggcatcgaggttctgaaccgcgagcatgttatctgccatctggatgatggcgct
gacctgttcatggaactgactgtgaataccggcaagggctatgtctctgccgataagaac
aagccagaagacgcacccattggtctgatcccaatcgatgcgatctactcgccggtgaaa
aaggtgtcttatgacgttcagcctacccgtgagggccaggtgctggactatgacaagctg
acgctgaaaatcgaaacagacggttccgttaccccggatgacgccctggcctatgccgcg
cgtatcctgcaggaccagctgtcgatcttcgtcaacttcgaagagcccgagtcggcgaac
cgtcaggacgaagacgatggtctcgagttcaacccgcttctgctgaagaaagtggacgag
ctggaactgtctgtccggtcggcaaactgcctcaagaacgacaacatcgtttacatcggc
gatctgatccagaagaccgaagcagaaatgctgcgcacgccaaactttggccgcaagtcg
ctgaacgagatcaaagaagtgctgtccggcatgggtctgcacctcggcatggacgtcgag
gactggccaccagacaacatcgaagatctggccaagaagttcgaagacacgttctaa
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