KEGG   Phaeobacter sp. G2: N1037_22560
Entry
N1037_22560       CDS       T10616                                 
Symbol
tssC
Name
(GenBank) type VI secretion system contractile sheath large subunit
  KO
K11900  type VI secretion system protein ImpC
Organism
phae  Phaeobacter sp. G2
Brite
KEGG Orthology (KO) [BR:phae00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:phae02044]
    N1037_22560 (tssC)
Secretion system [BR:phae02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   N1037_22560 (tssC)
SSDB
Motif
Pfam: VipB VipB_2
Other DBs
NCBI-ProteinID: UWS82009
LinkDB
Position
unnamed5:23210..24706
AA seq 498 aa
MADEALQTEAAPAESAFGSSEFANLLHKEFRPKSDQAKTAVESAVKTLAEQALANTGLIS
DDALRSIESIVAEIDKKLTEQVNLILHNKEFQQLESAWRGLHYLVNNTETDEMLKIRVIP
ITKKELGKSLAKFKGTAMDQSPIFKKLYTEEFSQLGGEPYGSLVADFHFDHSPPDIELLG
EMSKIAAAAHAPLITGAEPSLFQMDSWSELSNPRDLTKIFQTPEYAAWRSLRESEDSKYV
GLAMPRFLGRMPYGSKTDPVDEFAFEEDTTGAESDKYSWVNAAYGMATNITRSFKSYGWC
SRIRGVESGGTLEELPSHTFPTTDGGVDQKCPTEIAIDDRREAELAKNGMMPLLHRKNTD
VATFMGAQSLHKPTEYDDPDATANANLGARLPYLFATCRFAHYLKCMVRDKVGSFKSRQD
MESWLQNWINNYVDFNADISSENEKARKPLAAAEVVVEEVEGNPGYYSSKFFLRPHYQLE
GLSVSLRLVSKLPSEKGG
NT seq 1497 nt   +upstreamnt  +downstreamnt
atggcagacgaagcactccaaaccgaagcggccccggcagaatcagcttttggctccagc
gaatttgcaaacctgttgcacaaggaattccgccctaagtcggaccaggccaaaaccgct
gttgaaagcgcggtcaaaaccctggcggaacaggcgctggccaatactggcctgatctca
gatgacgcgctgcgttcgatcgaaagcatcgtggcggagatcgacaaaaagctgaccgaa
caggtcaacctgatcctgcacaataaagagttccagcagctcgagagcgcctggcgcggg
ttgcactatctggtgaacaacaccgaaaccgatgagatgctgaagatccgggtgattccg
atcaccaaaaaggaactgggcaagagcctggccaaattcaaaggcacggcgatggatcag
tcgccgatcttcaaaaagctctataccgaagagttcagccagttgggcggcgagccctat
ggctcgctggtggcggatttccattttgaccactcgccgccggatatcgaactgctgggc
gagatgtcaaagattgccgctgcagcccatgcgcccctgatcaccggggcagagccttct
ctgtttcagatggacagctggtcggaactgtcgaacccgcgcgatttgaccaagatcttc
caaaccccggaatatgccgcttggcgatccctgcgggagagcgaagattccaaatacgtt
ggtctggcaatgccgcggttcctggggcggatgccctatggatccaagacagatccggtg
gatgaatttgcctttgaggaagacaccacaggtgcagagagcgacaagtattcctgggtc
aatgccgcctatggcatggccacaaatatcacccgctcgttcaaatcctacggctggtgt
tcccgtattcgcggggtcgaaagtggcggcacgctggaagagctgccttcgcataccttc
cccaccaccgatggcggtgtggatcagaaatgccccacggagattgccattgacgatcgc
cgcgaagcagagcttgccaaaaatggcatgatgccgctgttgcatcgtaagaacaccgat
gtggcgacattcatgggcgcgcaatcgctgcacaagcccaccgaatacgacgacccggac
gcaacggccaacgctaatctcggcgcgcgtttgccctatctttttgccacctgccggttt
gcccactatctgaaatgtatggtgcgcgataaggtcgggtcgttcaaaagccgtcaggat
atggaatcctggctgcaaaactggatcaacaattacgttgattttaatgccgatatctct
tcggagaatgaaaaggcgcgcaaacctctcgccgctgcagaagtggtggttgaagaggtc
gagggcaacccgggttattacagctcaaaattcttcctgcgcccgcactatcagctagag
ggcctgtcggtgtctctgcgtctggtgtcgaaattgccctcggaaaaaggaggctaa

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