KEGG   Phaeobacter sp. G2: N1037_22645
Entry
N1037_22645       CDS       T10616                                 
Symbol
tssM
Name
(GenBank) type VI secretion system membrane subunit TssM
  KO
K11891  type VI secretion system protein ImpL
Organism
phae  Phaeobacter sp. G2
Pathway
phae03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:phae00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    N1037_22645 (tssM)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:phae02044]
    N1037_22645 (tssM)
Secretion system [BR:phae02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   N1037_22645 (tssM)
SSDB
Motif
Pfam: IcmF-related_N IcmF-related IcmF_C IcmF_helical
Other DBs
NCBI-ProteinID: UWS82023
LinkDB
Position
unnamed5:46068..49640
AA seq 1190 aa
MIRRYLLPMFRSLYSALILLAIALSACTWFFAPYIGSADWRPFDGIQARVITIAVIWVLT
LLIIGLVFWLRRRRDRAMADDMVEAADVVDDDDVMLEEIGELRGKFKQAMAELRKSKNGR
RHLNVLPWYVIIGPPGSGKTTAIVNSGLQFPLADKLGKAAIGGVGGTRNCDWWFTNDAVL
IDTAGRYTTQESDAEADNVAWLGFLGLLKKYRKRQPINGALVAISLSDLSLQDEMTQKSH
AQAVRRRLSELRERLGVRFPVYVLFTKADLIAGFQEYFDTLGKEEREQVWGFTLPLIKSK
KDAAAIEHFDEEFAGLLGQMNAQLLEKMQAETDHQRRALVAGFPSQLASMRAVAKEFLTE
VFQDNRYEQRQMLRGVYFTSGTQEGTPIDRLMLGMAQTFGIGRQAIGTGQGTGRSFFLTR
LFEGVLFPEAGLVSADDKVERRYRWTRRAAITATVLVAAAMGGLWVNSFFQNAEFIRKAE
AQVVEYQARAATLPASPVGDTDLVPVAEALNLLRDMPGNPVLSDPQPERAMTYGLYQGEV
IGTQTAQTYRAALNQRLLPRLLVRLEEQIAGNVNNPDVLYEALKIYLMLGLQGPMNPDLV
KEWMRLDWELVAYPGAARGQMRNDLMDHLSALLSQPMEEIALNGPLVEQAQNILSEMPLA
QRVYNGIINSNQATSLPKWRLTEIGGPSVKRVLVRSSGKPLNEGVEGIFTYDGFNNVFLP
EAVSVSERVQNEAWVLGERAGDGQSEAALLALSRDVLDLYYNDYISRYDQILGDVDIVPL
ESLSHAVEVTNVLSGPTSPIMNILTEISRETRLAEDRSALDSASLNEGVSQVVGIETRSG
MSIQGQILLEALINSAANAPGEAPKPPGSYVQERFQWLHDLVVRLEGQPSRLDDLMGSLQ
LVYQELNKMSFSGVASGESGQALLQFQQTASRIDGPIQRWATQISAGSSGITSEGTRASI
NARWQSAVLPFCQKALDNRYPFNRRARADVAMVDFAKLFAPGGLIDGFFDENLLKYVDTR
SRPWTWKRVNDVDLGISQAVLQQMQYAAEIRDAFFNGAANPSVQFQITPKALDPKAKEVL
LEIDGSKVSYNHRMGQPTPVAVNWPGSVGLARITLLPQRRGNENTLSRDGPWAWFRLLDA
AEVRRTNVSDRRRVNFRVGGRLALFELQSGSVVNPFALPAMAKFRCPKSM
NT seq 3573 nt   +upstreamnt  +downstreamnt
atgatccgccgttatcttttgccgatgtttcgatcgctctattcggcgctcatcctgctg
gcgatcgcgctttcagcctgtacctggttttttgcgccctacattggcagcgctgactgg
cgtccctttgacggcattcaggcgcgggtgatcaccattgcggtgatctgggtcctgacc
ctgctgatcatcggattggtattctggctgcgacgccgccgtgaccgagcgatggctgac
gacatggtcgaagccgcagatgttgtcgatgatgacgatgtgatgctggaagaaatcggc
gagctgcgtggaaaattcaagcaggcgatggcagagctgcgcaagtccaaaaacgggcgg
cggcatctgaatgtgctgccttggtatgtgatcattggcccgccgggatcagggaaaacc
acggccattgtgaactcgggcctgcagtttcccctggcggacaagctgggcaaagccgcc
attggtggtgttggcggcacgcgcaactgtgattggtggttcaccaatgacgcggtgctg
atcgacaccgccgggcgctataccacacaggaaagcgacgcagaggcagacaatgtcgcc
tggcttggctttttgggcctgttgaaaaagtaccgcaagcgccagccaatcaatggggct
ttggtggcgatctcgctgtcggatctttcgctgcaggacgagatgacacaaaaatcccat
gcccaggctgtgcggcggcgcttgtctgagctgcgcgaacggcttggggtgcgctttccg
gtctatgttctgttcaccaaggccgacctcatcgcgggctttcaggagtattttgacact
cttggcaaagaagagcgcgagcaggtctggggctttaccctgccgctgatcaaaagcaaa
aaagacgccgccgcaattgagcattttgacgaggagtttgcagggcttctggggcagatg
aatgcgcagctgttggagaaaatgcaggcagaaaccgatcatcagcgccgcgcgctggtg
gcaggtttcccgtcgcagctggcctcgatgcgggccgtggccaaagagtttctgaccgag
gtctttcaggacaaccgttatgagcaacgccagatgctgcgaggggtctatttcacctcc
gggactcaggaagggacgccgattgaccggctgatgctgggcatggcgcagacctttggc
attggacggcaagccatcggcaccggccaggggacggggcggtcctttttcctgacccgc
ttgtttgaaggcgtgttgttccccgaggccggcctggtttccgcagatgacaaggttgag
cgccgctatcgttggacgcggcgcgcggcgattaccgcaactgtactggtggctgcggcc
atgggcgggctttgggtgaattccttctttcagaacgccgagttcattcgtaaggccgag
gcgcaggttgtcgagtatcaggctagggccgcaaccctgccagccagtccagtgggcgat
accgatcttgtgccggtggcggaggcacttaacttgctgcgtgacatgccgggcaatccg
gtgttgtcagatccgcagcctgaacgcgccatgacatatggcctgtatcagggcgaggtc
attggcacccagacggcacagacctatcgcgccgcgctgaaccaacgcctgttgccgcgg
cttctggtgcgtctggaagaacaaattgcaggtaatgtgaacaatcctgatgtgctgtat
gaagcgctgaagatctatttgatgctgggcctgcaggggccgatgaatccggatctggtc
aaggaatggatgcggctggattgggaattggtggcctatcctggcgccgcacgtgggcag
atgcgcaatgacttgatggatcatttgtcggcgctgctgtcgcaaccgatggaagagatc
gccctgaacggtccactggtggagcaggcgcagaatatcctgtcggaaatgccgctggca
cagcgggtttacaacgggatcatcaattccaatcaggcgaccagcctgccaaaatggcgt
ttgaccgaaattggcggtccttcggtaaagcgggtccttgtgcgcagctctggtaagccg
ctgaacgaaggtgtcgagggtatttttacctatgacggctttaacaacgtgtttttgccc
gaagcggtgagtgtttccgaacgggtacagaatgaggcctgggttctgggcgaacgggcg
ggggatggccaaagtgaagcggcgcttttggcgttgagccgcgatgtgctggatctctat
tacaacgattatatcagccgctatgaccagatcttgggggatgttgatatcgtgccgctg
gagtcgctcagccatgcggttgaagtgacaaatgtcctgtccgggccgacctcgccgatt
atgaatatcctgacggaaatcagccgcgaaacccggctggccgaggatcgatcagcactg
gattccgcttcgctgaacgagggtgtttcccaggttgtcggcatcgaaacccggtcgggt
atgtccattcaggggcaaattctgctggaagctctgatcaattctgccgccaacgcgcca
ggagaggcccccaaaccgccagggtcctatgtgcaggaacgctttcagtggctgcacgat
ctggtggtccggctagaggggcagccttcgcggttggatgacctgatggggtctttgcaa
ctggtctatcaagagctgaacaagatgtcgttcagcggtgtggcctcgggggaaagtggt
caggcgctgctgcaattccagcagacggcgtcgcggattgacgggcctattcaacgctgg
gcaacacagatttcggcgggctcgtctggcattacatccgagggcacgcgggcgtcgatc
aacgcgcgctggcaatctgcggtactgccgttttgtcaaaaggccctggacaaccgctat
ccgttcaaccggcgtgcgcgggcggatgtggcgatggtggactttgccaagctttttgcc
ccgggtgggcttatcgacgggttttttgatgaaaacctgctgaaatatgtcgatacccgc
agccggccctggacctggaaacgggtgaatgacgttgatctggggattagccaagcagtg
ttgcagcagatgcaatatgccgctgaaatccgtgatgccttctttaatggggcggctaat
ccttcagttcagtttcagatcaccccaaaggcgctggaccccaaggcgaaagaagttctg
ctggaaattgacgggtcaaaggtcagttacaatcaccgcatggggcaaccgacaccggtg
gcggtgaactggcccggatccgttggcctggcccggattaccctgctgccgcagcggcgt
ggcaatgaaaacaccctgtcgcgtgatgggccctgggcctggttccggctgctggatgcg
gcagaggtgcggcgcaccaatgtcagcgaccgacgccgggtgaacttccgtgttggcggc
cgcctggccctgtttgagttgcaatcgggatcggtggtgaacccctttgccctgcctgcc
atggcaaaattccgctgcccgaagtcgatgtga

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