Providencia hangzhouensis: PZ638_08800
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Entry
PZ638_08800 CDS
T09403
Name
(GenBank) DEAD/DEAH box helicase
KO
K19789
DNA repair protein RadD
Organism
phag
Providencia hangzhouensis
Brite
KEGG Orthology (KO) [BR:
phag00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
phag03400
]
PZ638_08800
DNA repair and recombination proteins [BR:
phag03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factor
PZ638_08800
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ResIII
Helicase_C
DEAD
SWI2_SNF2
DUF7577
zf-tcix
SLFN-g3_helicase
Zn_ribbon_3
AAA_30
AAA_22
AAA_16
Zn_Ribbon_1
T1R_D3-like
AAA
FAD_binding_4
Motif
Other DBs
NCBI-ProteinID:
WNK25947
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All DBs
Position
complement(1985229..1986986)
Genome browser
AA seq
585 aa
AA seq
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MPFVLRPYQQEAVNATVDYFRKQTAPAVIVLPTGAGKSLVIAELARLARGRVLVLAHVKE
LVEQNHAKYLAYGLQADIFAAGLNRKESQSKVVFGSVQSVARNLKAFDAHFSLVIIDECH
RISLNDKSQYQQIIQVLQANNPSLRILGLTATPYRLNSGWIYQYHYHGMVRGDENCFFRE
CIYELPLHYMIKNKFLVPPERLDMPVLQYDFSQVSLTSSGIFNEQELNLSLKKQQRITPK
IIEQVIEYATPLQGCMIFAATVEHAKEILSYLPKNSAALVTAETPAIDRQAIIKQFKNKE
LHYLVNVSVLTTGFDAPHVDVIAILRPTESVSLYQQIVGRGLRLYEGKTRCLILDYAGNP
HDLFRPEVGSSQPNSTSVPVQVFCPLCQFANIFWGKCTSDGQIIEHYGRRCQGWEEDENK
QKKQCEFRFRFKQCPHCGAENDIAARRCQKCQEVLTDPDDMLKAALKLKDALIIRCGGMQ
FITGSDNKGEWIKINYYDEDGTCVSERFRLATPAQKRVFEYRFLREHQRAPGVPFKWNNA
NDILVQQSLLRYPQFIVARKKERFWEIREKIFDYQGRFRVAAPLS
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atgccttttgtattacgcccttaccaacaagaagctgtcaatgcgacggttgattatttc
cgcaagcagactgcccctgccgtgattgtcttaccaacaggagcaggtaaaagcttagtg
attgccgaattggctcggcttgctcgcgggcgagtgttggtattagcccatgtgaaagaa
ttagttgagcagaaccatgctaagtacctcgcatatggcctacaagccgatatatttgcc
gctggcctgaaccgcaaagaatctcaaagcaaagtggttttcggtagtgtgcaatctgtt
gctcgcaatcttaaggcatttgacgcacatttttccctagtaattattgatgagtgtcac
cgtataagtttgaatgataagagccaataccaacaaattattcaagttttacaagctaat
aacccttcattacgtattttaggattaacagccaccccttaccgcctcaacagtggctgg
atttaccaataccattaccatggcatggtacgtggtgatgaaaattgttttttccgagag
tgtatttatgaactccccctacactatatgattaaaaacaaattcttagttccacctgaa
cgcttagacatgcctgttttacaatatgattttagccaagtttcactaacatcatcgggt
atttttaacgaacaagaacttaatttgtcattaaaaaaacaacaacgcattacgcctaaa
attattgagcaagttattgaatatgcaacaccgttacaaggctgcatgatctttgctgcg
acggtcgagcatgccaaagaaattctgagttatctaccgaagaatagtgcggcattagtg
acggctgaaaccccagcaattgataggcaagcaattattaagcaatttaaaaataaagaa
ttacattatctcgttaacgtttcagtattaacaacagggtttgatgcacctcatgtcgac
gtgattgctattttgcggccaacagagtcagtcagcttataccaacaaattgttggccga
ggattacgcctttatgagggaaaaacacgctgtttaatcttagattacgcaggtaatcca
cacgatttatttcggcctgaagtggggtcaagtcaaccaaattcaaccagtgtgcctgtg
caagttttttgcccattatgccaatttgcgaatattttttggggaaaatgtacctctgat
gggcaaattattgaacattacggccggcgctgccaaggctgggaagaagatgaaaataag
cagaaaaaacaatgtgaatttcgttttcgctttaaacaatgtccacactgtggtgcagaa
aatgatatagcggctcgtcgctgtcaaaaatgccaagaagtgcttaccgaccctgacgat
atgctaaaagccgccttaaaactcaaagatgcgttaattattcgttgtggtggtatgcaa
ttcattacagggagtgataacaaaggtgaatggattaaaatcaattattatgatgaagat
ggaacctgtgtttcagaacgttttcgcctagccacacccgcacaaaaacgcgtgttcgaa
tatcgttttttacgtgagcatcagcgtgccccaggtgttccgtttaagtggaataatgca
aatgatatattagtgcaacaatctttattacgatatccccaatttattgtcgcgcgcaaa
aaagaacgcttttgggaaattcgagagaaaatcttcgattatcaagggcgttttcgcgtt
gctgctcccctgtcataa
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