Providencia hangzhouensis: PZ638_14935
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Entry
PZ638_14935 CDS
T09403
Symbol
rhlE
Name
(GenBank) ATP-dependent RNA helicase RhlE
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
phag
Providencia hangzhouensis
Pathway
phag03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
phag00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PZ638_14935 (rhlE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
phag03019
]
PZ638_14935 (rhlE)
Enzymes [BR:
phag01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
PZ638_14935 (rhlE)
Messenger RNA biogenesis [BR:
phag03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
PZ638_14935 (rhlE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
HI1480
UvrD-helicase
UTP25_NTPase-like
P-loop_SecA
Motif
Other DBs
NCBI-ProteinID:
WNK23232
UniProt:
A0ABY9Z675
LinkDB
All DBs
Position
complement(3283513..3284841)
Genome browser
AA seq
442 aa
AA seq
DB search
MTTFSDLALNEEILLAINELGYESPTPIQQQAIPAVLAGNDLLASAQTGTGKTAGFTLPI
LQKLITTPRSGKDRKPIRALILTPTRELAAQVAENVKEYSRHLRIRSFVVFGGVSINPQM
MKLRGGVDILIATPGRLLDLEHQNAVDLSQVEVFVLDEADRMLDMGFIHDIRRVINKLPK
KRQNLLFSATFSDEIKQLANKLLNNPVTIEVAPRNSASEQVTQYVHLVDKKRKAELLSFM
IGRENWQQVLVFTRTKHGANRLAEHLNKDGVKAAAIHGNKSQGARTRALADFKSGDIRVL
VATDIAARGLDIEQLPYVVNFELPNVAEDYVHRIGRTGRAEATGMAVSLVCIDEAKLLKD
IEKLLKKSIPLMAIEGYEPDPSIKAEPIQKTPQRNERRSGDRNQGKPPRRSNSPSSKPSS
GKGASSPWKNAQKKVKQGRSDS
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
ttgactactttttcagacctcgcgttaaacgaggaaattttgcttgccattaatgaatta
ggttatgaaagccctacgcctattcaacaacaagctatcccagccgtgcttgcaggaaac
gaccttttagctagcgcccaaactggtacaggtaaaacagcgggttttacattgccaatt
ttacagaagcttattacaactcctcgatcaggaaaggatcgcaagcctattcgtgcgtta
attttgacgccaacaagggagcttgcagcgcaagttgctgaaaatgtaaaagaatatagc
cgtcacctgcgtattcgttcttttgtcgtctttggtggggtaagtattaacccacaaatg
atgaagttacgtggcggggttgatatcttaattgcaactccggggcgcttattagattta
gaacaccaaaatgcagtagatctttcccaagtcgaagtttttgttctggatgaagctgac
cgtatgttagatatggggttcattcatgatattcgtagggtgattaataaattacctaaa
aaacgtcaaaacttattgttctcagcgacgttttctgacgaaatcaaacaattggcgaat
aaattactcaataaccctgtaactattgaggttgctccgcgaaactcagcttctgagcaa
gtgactcaatatgttcatctggttgataaaaaacgaaaagcggaattactttcgtttatg
attggccgtgaaaactggcaacaagttcttgtttttacacgtacaaaacatggtgcaaac
cgtctcgctgagcatttaaataaagatggtgtcaaagctgctgctatccatggtaacaag
agccaaggggctcgtactcgtgcattagctgattttaaatctggggatattcgtgtgtta
gtggcaacggatatcgcagctcgtggccttgatattgaacagcttccttatgtggtgaat
tttgagcttcctaatgttgcagaagactatgttcaccgtatcggtcgtacaggccgtgca
gaagcaactgggatggcagtttccttagtatgtatcgatgaggctaagttactcaaggat
attgaaaaattattgaaaaaatcgattccattgatggcgattgaaggctatgagcccgac
ccctccataaaggcggagcctattcaaaaaacaccacaacgcaatgaacgtcgttcaggt
gatagaaaccaaggtaaaccaccacgtcgcagtaattcgccatcgtcaaagcctagttca
gggaagggggcaagttccccatggaaaaacgcccagaaaaaagtcaaacaagggcgaagt
gacagttaa
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