Providencia hangzhouensis: PZ638_15850
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Entry
PZ638_15850 CDS
T09403
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
phag
Providencia hangzhouensis
Pathway
phag03030
DNA replication
phag03430
Mismatch repair
phag03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
phag00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PZ638_15850 (dnaE)
03430 Mismatch repair
PZ638_15850 (dnaE)
03440 Homologous recombination
PZ638_15850 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
phag03032
]
PZ638_15850 (dnaE)
03400 DNA repair and recombination proteins [BR:
phag03400
]
PZ638_15850 (dnaE)
Enzymes [BR:
phag01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PZ638_15850 (dnaE)
DNA replication proteins [BR:
phag03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PZ638_15850 (dnaE)
DNA repair and recombination proteins [BR:
phag03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PZ638_15850 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
DNA_pol_IIIA_C
tRNA_anti-codon
Arena_ncap_C
Motif
Other DBs
NCBI-ProteinID:
WNK23391
LinkDB
All DBs
Position
complement(3478395..3481877)
Genome browser
AA seq
1160 aa
AA seq
DB search
MASPRFIHLRVHSDYSMIDGLAKTGPLVKKVASMGMPAFAITDFTNLCGLVRFYGAAHGA
GIKPIIGADFYVESELLGDEISHLTVLARNNEGYQNLTLLISEAYQKGYGAVGPTIKREW
LAKHKDGLILLSGGRKGDVGQFLLRGNQSLVDECLAFYETHFPDSYYLELVRTGRPDEES
YLHAAVELATKKGLPVVATNDVCFIESSDFDAHEIRVAIHDGFTLADPKRPKNYSPQQYL
RSEEEMCELFADIPEALENSVEIAKRCNVTIRLGEYFLPQFPTGDMKTEDFLVMRSKEGL
EERLEFLFPDEKIRAERRPEYDERLDIELNVINQMGFPGYFLIVMEFIQWSKDNGVPVGP
GRGSGAGSLVAYALKITDLDPLEFDLLFERFLNPERVSMPDFDVDFCMEKRDQVIDHVAQ
MYGRDAVSQIITFGTMAAKAVIRDVGRVLGHPYGFVDRISKLVPPDPGMTLEKAFEAEPQ
LPEIYEADEEVKALIDMARKLEGVTRNAGKHAGGVVIAPTKITDFAPLYCDAEGNNPVTQ
FDKNDVEYAGLVKFDFLGLRTLTIINWALEMINARRAKKNLEPVDIAAIPLHDQKSFDML
QRSETTAVFQLESRGMKDLIKRLRPDCFEDMIALVALFRPGPLQSGMVDNFIDRKHGREE
ISYPDVQWQHESLKPVLEPTYGIILYQEQVMQIAQVLAGYTLGGADMLRRAMGKKKPEEM
AKQRSVFEEGAIKNGVDGELSMKIFDLVEKFAGYGFNKSHSAAYALVSYQTLWLKAHYPA
EFMAAVMTADMDNTEKVVGLVDECWRMGLKVLPPDINSGLYHFHVNDEGEIVYGIGAIKG
VGEGPIEAIVEARQQGGIFKEIFDLCARVDIKKINRRVMEKLIMAGAFDRLGPHRAALMS
SLEDALKAADQHAKAEAIGQADMFGVLAEAPEQVESSYASVPKWPEQVVLDGERETLGLY
LTGHPITRYLSEIERYTNGLRLKDVNPTPRGQVTTVVGLVLSAKVITTKRGNRIGICTLD
DRSGRLDIMLFSDALDKYQHMLEKDNILIATGQVSFDDFNGGNKMTVRELMDISEAREKY
ARGLAISLSDKQINDQLLNRLRSTLEPHRSGTIPVHLYYQKDDARAKLKFGVVWRVTPVD
PLLNDLRTLLGSEQVELEFD
NT seq
3483 nt
NT seq
+upstream
nt +downstream
nt
atggcatcacctcgttttattcatttacgtgttcacagtgactattccatgattgatggg
ctagccaaaacagggccactggttaaaaaagtggcttcaatgggtatgcctgcattcgcg
atcaccgattttactaacctttgcgggttagtccggttttatggtgcagcgcatggtgca
ggaatcaaacccattattggcgctgatttttatgtggaaagtgaattattaggtgatgaa
atatctcacctaactgttttagcacgtaataatgaaggctatcaaaaccttaccttacta
atttctgaagcataccaaaagggctatggtgcggttgggccaacgataaaacgagaatgg
ctggccaagcacaaagacggcttgattctgctgtccggtggccgtaaaggggatgtcggg
caatttctattaaggggaaaccaatccttagtggatgagtgccttgcattctatgaaact
catttcccagatagctactatttagagttagtcagaacaggccggcctgatgaagaaagt
tatctacatgcggctgtcgagttagcgactaaaaaaggcctacctgtcgttgcaacgaat
gatgtttgtttcattgaaagtagtgattttgacgctcatgaaatacgtgttgctatccat
gatggttttacattagcagatccaaaaaggcctaaaaattatagccctcagcaatattta
cgttccgaagaagagatgtgtgagctgtttgctgacatccctgaagcgctagaaaacagt
gtagagattgctaagcgttgtaatgtgacgatccgtttaggtgaatacttcttacctcaa
ttcccaacaggggatatgaaaacagaagactttttagttatgcgctctaaagaagggctc
gaagagcgtttagaatttctgtttcctgatgaaaaaatcagggcagaaagacgtcctgag
tatgatgaacgtttagatatcgaactcaacgtaatcaaccaaatgggtttccctggctac
ttcttgatagttatggagtttatccaatggtcgaaggataacggcgtacccgttgggcct
ggacgaggttcgggggcaggttcccttgttgcctacgcactcaaaattactgaccttgac
ccgttggagttcgatttactatttgagcgtttcttgaaccctgagcgtgtttcgatgcct
gactttgacgtcgatttctgcatggaaaaacgcgaccaagtcattgatcacgtagcccaa
atgtatgggcgtgatgccgtttcacaaatcattacctttggtacgatggcggcaaaagcg
gttatccgcgacgtggggcgtgtacttgggcacccatatggttttgttgatagaatttct
aaattagtgccgccagatcccggtatgacactagaaaaagcattcgaagcagagccacag
ctccctgaaatttatgaagctgatgaagaggttaaagcgcttatcgatatggcgcgtaaa
ctcgaaggggtcactcgaaatgccggtaaacatgcgggtggggtggttatcgctccaact
aaaattactgactttgcgccactgtattgtgatgcggaaggtaataaccccgtcacgcaa
ttcgataaaaacgatgtcgaatatgcagggctagtgaagtttgacttcctcggcttacgg
acgttgacgatcattaactgggcgttggaaatgatcaacgcgcgccgtgctaagaaaaac
ttagagccggttgatattgcggcgattccgctgcacgatcaaaaaagctttgatatgctg
cagcgctcagaaaccacggcagtattccagttggaatcccgtggaatgaaggacttaatt
aagcgattacgtcccgactgctttgaggatatgatcgctctggtagcattattccgcccc
gggccattacaatcaggcatggtagataactttattgaccgtaagcatggtcgtgaagaa
atttcgtatccagatgtacaatggcaacatgaatcattaaaacctgttctagagcccaca
tatggtattattttataccaagaacaggttatgcaaattgctcaggttttagccggttac
acgcttggcggtgcagatatgctgcgtcgtgcgatggggaaaaagaaacctgaagaaatg
gcgaagcagcgttctgtttttgaagaaggagcaatcaaaaacggggtagacggcgagtta
tcaatgaaaatctttgacttggtagagaaatttgccggttatgggtttaataaatcgcac
tcagcagcttatgctttggtttcttatcaaacattatggttaaaagctcactatcccgct
gaatttatggctgctgtaatgaccgctgatatggacaacacggaaaaagtggtcggttta
gttgatgaatgttggcgaatgggcttaaaagtattgccaccagatatcaatagtgggctt
tatcacttccatgtgaatgatgaaggtgagatagtttacggtattggtgcaattaaaggg
gtcggtgaaggcccgattgaggcgattgttgaagcgcgtcaacaaggcgggatatttaaa
gagatttttgacctttgtgcgcgagtcgatattaaaaaaattaatcgtcgtgtgatggaa
aagcttatcatggcaggggcatttgaccgattaggccctcaccgtgcggcattgatgtct
tcccttgaagatgcattaaaagcggctgaccaacacgctaaagcagaggcaataggccaa
gcagatatgtttggtgtattagcggaagcacctgaacaagttgaaagttcatacgccagt
gtgcctaaatggccagagcaggtggtattggatggtgaacgcgaaacgcttggtttatat
ttaacagggcatccaataacgcgatacttgagcgaaatagagcgctatactaatgggctt
agattaaaagatgtgaaccccacccctcgtggtcaagtgacaactgtggtaggtttagta
ctttcagctaaagtcattacaaccaagcgtggaaatagaataggtatttgtacgcttgat
gatcgttccggtcgtctggatattatgttattttcagatgcactcgataaataccaacat
atgttggaaaaagacaatatcctgatagccaccggtcaggtcagctttgatgatttcaat
ggtggtaataaaatgacagtgcgtgagttaatggatattagtgaagcaagggagaaatat
gcacgaggacttgcaatttcactgtcagataaacaaattaacgatcaattgctgaaccgg
cttcgcagtactcttgaacctcatcgttcaggaacgatcccggttcatctgtattaccag
aaggatgatgccagagccaagcttaaatttggtgttgtttggcgtgtgacgccagtggat
ccccttctgaacgatcttcgaactctgctgggtagtgagcaggtagaattagaatttgac
taa
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