Providencia hangzhouensis: PZ638_16060
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Entry
PZ638_16060 CDS
T09403
Symbol
recB
Name
(GenBank) exodeoxyribonuclease V subunit beta
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
phag
Providencia hangzhouensis
Pathway
phag03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
phag00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
PZ638_16060 (recB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
phag03400
]
PZ638_16060 (recB)
Enzymes [BR:
phag01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
PZ638_16060 (recB)
DNA repair and recombination proteins [BR:
phag03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
PZ638_16060 (recB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
AAA_30
AAA_11
Motif
Other DBs
NCBI-ProteinID:
WNK23429
LinkDB
All DBs
Position
complement(3523027..3526635)
Genome browser
AA seq
1202 aa
AA seq
DB search
MNKVQVESQLLNVFSLPLRGQRLIEASAGTGKTYTIGILYLRLLLGLGGVNAFPRPLSVE
EILVVTFTEAATNELRGRIRQRIHDMRLVCLRNGVGFESQPEYLELLAELSGESQRKFAA
QWLQAAERQMDEAAIYTIHGFCQRMLVHNAFESGVLFEQTMIQDEFPIQKQACADFWRRH
FYPLNYSMTKVIQSLWTSPEALLSEIKPFLQGDIPLIINQPKQVETLEERHQRLILLIES
VKTAWLENSADFEKLIADSDVDKRSYSTRFLPTWLIKIGEWAQEKTEDYQLPKDLERFSQ
TVLHKKSKSGLGPEHIVFQSIDELLSQSLTLKDLVIPLAISEVRGAITNEKHNRGEMGFD
DLLTRLDGALAQESGKFLAQAISQRFPVAMIDEFQDTDAQQYRIFQRIYREVNDSALLFI
GDPKQAIYAFRGADIFTYIEAKNEVSAHYTLETNYRSSQNMVEAINHLFGRCQSPFIFEQ
IPFQPVNFAKQNSGKKLIHDGEVVKALTFWQVEAEGVSVAEYEQATASQCAAQIAQYLQG
GFQGSSYFDNKGAHTPVEASDITVLVRSRREAVLIRDALNRLNIPSVFQSNRESVFSTPE
ARDLLWLLQAVLTPEKERVLRSALATGILGLTAKQIDDLNHDEKSWEKIVDEFARYGMVW
QKRGVLPMLRMVMAQRQIAETLLSGADGERRLMDVMHIGELLQEMSLQLEGEHTLTRWLA
QQIAHPDHQSDVQQMRLESDKHLVQISTIHKSKGLEYKIVWLPFASNFLPQSKGLYHDRT
DYAVRLDLNDSEENVALADEERLAEDLRLLYVALTRAIYHCSVGIAPLIKGNRKKSGETD
LHLSALGYVIQKGQAGDSLLLNDMLAEISNDVIDVAVINQPKSERVLLEQNDSVNLSARA
VIRHFNDHWRVTSYSGLSYGSSHTEAEESVSALQFANSLAPNMDIEASVDVEQQEDEPLI
LTPHQFPKGASPGTFLHNLMEEIDFSGHISQEWLSEKLESSGFDIQWAPMLQEWLNAIVQ
APLSEDGLCLSALQAQDQLDEMQFYLPIDSLLSASHLDKITHQYDPLSQRCPPLNFERVQ
GILKGFIDLTFYWKGKFYLLDYKSNYLGKDASFYTQEAMAEAMIDHRYDLQYQLYSLALH
RYLKQRMPNYDYETHFGGVYYLFLRGIDNIHSSNGIFFYRPIEPFIEALDSLFKNVQQGE
AT
NT seq
3609 nt
NT seq
+upstream
nt +downstream
nt
gtgaataaagtgcaggtagagtcccaattactgaatgttttttccttacctctgcgtggg
cagcggttaattgaagcatctgcaggaacgggtaaaacatatacaattggtatactttat
ctgcggcttttattaggtctgggaggcgttaatgcgtttcctaggccgttaagtgttgaa
gaaattttagttgtaacatttactgaggctgcgacgaatgagttacggggacgtattcgt
caacgtattcatgatatgcgcttagtttgcttaagaaatggcgttggtttcgagtcgcag
cctgagtatcttgaattattagctgagctttcgggggaatcccaaagaaaattcgctgcg
caatggttgcaggcagcggaaaggcaaatggatgaagccgcgatatatactatccatggt
ttttgccaaagaatgctagttcataatgcatttgagtcgggagtattgttcgaacaaaca
atgattcaagatgaatttccgattcaaaaacaagcttgtgcagacttttggcgccgccat
ttttatcctctgaattactccatgacgaaagtcattcagtcactgtggactagtcctgaa
gcattactttcggagattaaacctttcttgcagggtgacattcctttaattattaaccaa
ccgaaacaagtagaaactctagaagaacggcatcagcggctaatcttgttaattgagtca
gttaaaacggcctggttagaaaactcagcggattttgagaagcttatcgctgattcagat
gtggataaacgaagttatagtactcgttttctacctacatggctgataaaaataggcgaa
tgggctcaagaaaaaacagaagattatcagcttcctaaagatcttgaacgtttctcacaa
acggtattacataaaaaatcaaaaagtggcttagggccagaacatattgttttccaaagt
atagatgagctactttctcaatcattaactctaaaagatctggttattccactggccatt
tcagaggtgaggggagcgattactaatgaaaaacataatcgtggtgaaatggggtttgat
gatttattgacccgtttagacggtgctcttgctcaagaaagtgggaaatttttagctcaa
gctattagtcaacgctttcctgttgcgatgatagatgagtttcaagatacagatgcacag
caataccgtatttttcaaagaatttatcgggaagttaatgacagcgcattacttttcatc
ggcgaccctaaacaagctatatatgcttttcggggcgcagatattttcacctatatcgaa
gcaaaaaatgaagttagtgctcactacacattagagactaactatcgttcatcgcaaaat
atggttgaagctattaatcacttatttggccgctgtcagtcaccatttatttttgagcaa
attccttttcaacccgttaatttcgctaagcaaaatagcggtaaaaaacttattcatgat
ggcgaagtggtcaaagcacttacattttggcaagtggaagcagaaggtgtctcagttgct
gaatatgaacaagcaacagcttcacaatgtgcagcgcaaatcgcacaatatttacaaggc
gggtttcagggtagtagctattttgacaataaaggagcacatactcctgtagaagcttct
gatattactgtgttggttcgtagccgacgtgaagctgtattgattcgtgatgctttaaat
cggttaaatatcccttctgtgtttcaatctaatcgggaaagtgtattttcaacaccggaa
gcgagagatttactgtggttactacaggcagttttaacaccggaaaaagaacgtgttttg
cgcagtgcattggcgacaggaatattgggtttaaccgctaaacaaattgatgacctaaac
catgatgaaaaatcgtgggaaaaaattgtagatgaatttgctcgttatggcatggtgtgg
caaaaacgaggcgtgctccccatgcttagaatggtcatggcgcagaggcaaattgcagaa
acgttgttatcaggtgctgatggagagcgtcgcttaatggatgtgatgcatattggtgag
ctgttacaagaaatgtcattacagcttgaaggtgagcacacactaacacgttggctagcg
caacaaattgcccatcctgatcatcaatctgacgtacaacaaatgcgtcttgaaagtgat
aaacatttggtgcagatcagtaccatacataaatctaagggccttgaatataagattgtt
tggttgccttttgcgagcaattttctaccccaatctaaaggtttatatcacgatagaacg
gattatgcagtacggctagatttaaacgatagtgaagaaaatgttgctctagctgatgaa
gagcgtctagcagaagacctacgcttattatatgtagcactcacaagggctatctatcac
tgtagtgtcggtattgcaccattaattaaaggtaacagaaaaaaaagtggtgaaaccgat
ttacacttatctgcgctgggttacgtcatccaaaaagggcaagcaggagatagcctacta
ttgaacgacatgctagctgaaattagcaatgacgttattgatgttgcagtgattaatcaa
cctaagtcggaacgcgtgctattagaacaaaatgatagcgtaaacttatcggcaagagca
gtgattcgtcattttaatgaccactggcgtgttaccagctattcggggttaagttatggt
tcaagccatactgaagcagaagaatcagtttcagcattgcaatttgctaattcattagcc
cctaatatggatattgaggctagtgttgatgtggagcaacaggaagacgagcctcttatc
ctaactcctcatcaatttcctaaaggtgcatcaccgggaacatttttgcataacttgatg
gaggagattgattttagtgggcatatttctcaagaatggttgtctgaaaaacttgaatcc
tcagggtttgacatacagtgggcaccgatgctgcaagaatggctgaatgcaattgtacag
gcaccactatcagaagacgggttatgtttatctgcattacaggctcaagaccaattggat
gaaatgcagttttatctccctattgattccctattgagtgccagtcatttagataagata
acgcaccaatatgacccattatcacaacgttgtcctccgctaaattttgagagagttcaa
ggtattttaaaggggtttattgacctcaccttttactggaaaggcaaattttatcttctt
gattataaatcaaattatttagggaaagatgccagtttttatacccaagaagccatggct
gaagcgatgatagaccaccgctatgatttgcaatatcaactatattcgttagcgttacat
cgttacctcaagcaaagaatgcctaattatgattatgaaactcattttggtggcgtttat
tatttatttttacgaggcatagataatattcactcaagtaacggcattttcttttatcgc
cctatagagccttttattgaagcgttagatagcttatttaaaaatgttcagcaaggggaa
gcaacttaa
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