Providencia hangzhouensis: PZ638_19405
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Entry
PZ638_19405 CDS
T09403
Symbol
recQ
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
phag
Providencia hangzhouensis
Pathway
phag03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
phag00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PZ638_19405 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
phag03019
]
PZ638_19405 (recQ)
03400 DNA repair and recombination proteins [BR:
phag03400
]
PZ638_19405 (recQ)
Enzymes [BR:
phag01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PZ638_19405 (recQ)
Messenger RNA biogenesis [BR:
phag03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
PZ638_19405 (recQ)
DNA repair and recombination proteins [BR:
phag03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
PZ638_19405 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
SecA_DEAD
zf-CXXC
Motif
Other DBs
NCBI-ProteinID:
WNK24059
LinkDB
All DBs
Position
complement(4238194..4240020)
Genome browser
AA seq
608 aa
AA seq
DB search
MSTACVINQLSLAEHVLNSTFGYQSFRPGQDAVIGAILDNRDCLVLMPTGGGKSLCYQVP
ALVKEGVTLVVSPLISLMKDQVDQLRLHGVNAACLNSSQTSQEQRQIMELCSQGEIKLLY
VAPERLLTDYFLSQLAGWNITLLAVDEAHCISQWGHDFRPEYRALGQLRQSLPNVPVMAL
TATADETTRADIIRLLELHEPLVHVSSFDRPNIRYTLVEKYKPLDQLWFFIKGQKGKAGI
VYCNSRSKVEETTERLQKRGLSVAAYHAGLDAAQREWVQDAFLKDNLQVVVATVAFGMGI
NKSNVRFVAHFDIPRNIEAYYQETGRAGRDGVEAEAILFYDPADMAWLRRCLEEKPAGMQ
QDIERHKLNAIAAFAEAQTCRRLVLLNYFGENRQQPCGNCDICLDPPKQYDGLVDAQKAL
SCIYRVGQRFGIGYIVEVLRGANNQRIRDLGHDKLPVYGIGKEQSNEHWVSVIRQLIHLG
MITQNITHFSALQLTEAARPVLRGEAVLKLAVPRVLVVKSRNQQNKIYHGNYDKKLFAKL
RKLRKSIADEENIPPFVVFNDATLIEMAEHTPTSPAELLLINGVGERKLERFGVAFMALI
QDHLEGYE
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
gtgtccactgcttgcgtcattaaccaactttcattggctgaacatgtgctcaatagtaca
ttcggctatcagtcatttcgccctgggcaagatgctgtcattggggctattttggataac
cgtgattgcttagtgttaatgccaacagggggtggtaaatccctttgctaccaagttcct
gctttagttaaagaaggtgtcacactggtcgtttcgccattaatatcattaatgaaagac
caagttgaccaattaaggttacatggggttaatgctgcgtgtttaaattcatcacaaacg
tcacaagaacaacgtcaaatcatggaattgtgcagtcagggggaaataaaattactgtat
gttgctcctgaacggttgttaactgattatttcttaagccaattagcaggatggaacatc
accttgctagcagtggatgaagcccactgtatttcccaatggggacatgattttcgccct
gaataccgcgcactaggccaattacggcaatcattacctaatgtacccgtgatggcgtta
accgcaactgcggatgaaaccacacgtgcagacattattcgtttattagagctacatgag
ccattagtccatgtgagtagctttgataggccaaatattcgttataccttagtcgaaaaa
tataagcctttagatcaactttggttttttattaaagggcaaaaaggaaaagcgggtatt
gtttattgtaatagtcgcagtaaggttgaagaaacgacagagcgcttgcaaaagcgaggc
ttaagtgttgcggcataccatgcagggttagacgctgcccaacgggagtgggtacaagat
gcatttctaaaagataacctacaagttgtcgtggcgacagtggcttttgggatgggaatt
aacaaatcaaacgttcggtttgtcgctcattttgatattccgcgtaatatcgaagcatat
tatcaagaaacagggcgggcaggtcgtgacggtgttgaagccgaagccattttattttat
gaccctgcagatatggcatggttacgtcgctgtcttgaagaaaagcctgcgggtatgcag
caagatatagaacggcataagctgaatgccatcgcggcttttgctgaagcacaaacttgc
cgccgtttggtgctactcaattattttggtgaaaatcgccagcagccttgtggcaattgt
gatatttgcttagacccaccaaaacagtacgatgggttagtggatgcgcaaaaagcgctg
tcctgtatttatcgtgttggtcagcgctttggtatcggctatattgttgaggttctgcgt
ggcgctaataatcagcgtattcgtgacttaggccatgataaactgcccgtctatggcatt
ggtaaagaacaaagtaatgaacattgggtcagtgtgattcgccaactgatccatttaggt
atgatcacacagaatattacgcatttttcagcgcttcaattaacggaggcagcacggcca
gtattacgtggtgaagctgtactaaaactcgcagttcctcgtgttttagtggtaaaaagc
cgtaatcaacaaaacaaaatttatcatggcaattatgataaaaagctctttgctaaactg
cgtaaattgcgtaaatccattgcagatgaagaaaatattccgccatttgtggtgtttaat
gatgcaacattaatagaaatggctgagcacaccccgacttcacctgccgaattactgtta
atcaatggtgttggcgaacgcaagctcgaacgttttggagtagcatttatggcgcttatc
caagaccatcttgaaggttatgaatga
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