Panicum hallii (Hall's panicgrass): 112872585
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Entry
112872585 CDS
T07366
Name
(RefSeq) transcription elongation factor TFIIS
KO
K03145
transcription elongation factor S-II
Organism
phai
Panicum hallii (Hall's panicgrass)
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
phai03021
]
112872585
Transcription machinery [BR:
phai03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
112872585
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TFIIS_M
Zn_ribbon_TFIIS
Med26
U-box
HVO_0758
Motif
Other DBs
NCBI-GeneID:
112872585
NCBI-ProteinID:
XP_025791420
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Position
9:2005797..2012188
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AA seq
633 aa
AA seq
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MASPAGANSAASSSRGPPLPLPFPFPAAAHFPSRDAVPFLPQHQHPPATSGGGEEVEEDE
GSMDDDSGEEDEAELADGAAHASQQRRASSAPGIGRAAMNGDIGARHTQEVHQWQQQSHF
YNRGTEQYGCTSSGGDEPGTIPMEMRMENGCGVIGRREGGPASSYWDLLRAHLSDPLTGV
LMDDAMILSCGHSYGSGGMQHIYRMKACGKCGQPITEDTIRPNLALRLAVQAFKREEDSA
NTLKRRKERLEQGFDLASPGCAAAAMERELLETFEAAKKAADAAAGEDDSPEADRCLDAL
RRLRAIRVNTDVLVSTQVGKRLRHLTKHPHSGIQAVATDLFGYWKKVVLEETGKKNGSSE
NERSSDSSGKIEKARPVKIERNSSSSSMKDEKRDVDVRGQRPDSVKVEKTTSNGSKAQPV
KVERVSKEVSRTPDTKKTASVPTGPPKLTSLVKCNDATRDKIRELLAEAFSKVPGETSND
DREEVRNILDQVDACDPFRVAVTVESALFEKLGRSTGAQKAKYRSIMFNLRADNNTDFRR
RVLIGQVRPERLPDISPEEMASDARKQENKQIKAKALFDCERGGAPKATTDQFKCGRCGQ
RKTTYYQLQTRSADEPMTTFVTCVNCNNHWKFC
NT seq
1902 nt
NT seq
+upstream
nt +downstream
nt
atggcttctcctgcgggggccaatagcgcggcctcctcctcgagggggccgcccttgccg
ttgccctttcccttccccgccgcggcccacttcccctcccgcgacgccgtccctttcctg
ccgcagcaccaacacccgcccgccacttccggcggcggcgaggaggttgaagaagacgag
ggcagcatggacgacgacagcggcgaagaggacgaggctgagctggcggatggagcggcc
cacgcctcgcagcagcgacgcgcttcctctgctccaggtattgggcgggcagcgatgaat
ggggatattggagcgaggcatacgcaagaggtgcatcagtggcagcagcagagtcatttt
tataaccgtggaaccgagcaatatgggtgtacttcgtctggaggggacgaacctggtact
atccccatggagatgaggatggagaatggatgcggtgttatcggaagaagagaggggggt
cctgcatctagctattgggacttgctgagagctcacctttctgatccgttgacaggtgtt
ctcatggatgatgcgatgattctatcatgtggccattcttacggaagtggtgggatgcag
catatctacagaatgaaagcttgtggtaaatgtgggcagccaattaccgaggacacaatt
cgaccaaacttggctcttcgccttgcagttcaggcatttaaacgcgaagaggattcagca
aacacattgaaaagaaggaaagagcgccttgaacagggttttgatctcgcctcgccgggc
tgcgccgctgccgccatggagagggagctgctggagacgttcgaggcggccaagaaggcg
gccgacgcggcggccggggaggacgactcgccggaggctgaccgctgcctcgacgcgctg
cgccggctgcgcgccatccgcgtcaacaccgacgtgctcgtctccacgcaggttggcaaa
cgtcttcgacaccttactaagcaccctcactcgggcattcaggcagttgctacagacctt
tttgggtactggaaaaaggttgttcttgaagagacaggaaagaaaaatggcagctcagag
aatgaaagatcaagtgattcttcagggaagattgagaaggcgaggccagtgaagattgaa
agaaattcttcatcatcaagcatgaaggatgagaaaagagatgtggatgttagaggtcag
aggcctgacagtgtcaaagttgagaagaccaccagtaatggttccaaagctcaacctgtg
aaggttgagagggtttccaaagaagtcagtagaactcctgatacaaagaagacagcatct
gtccccactggacccccaaagcttacatcccttgtcaaatgcaatgacgccacccgagac
aaaatccgggaattacttgctgaagctttctcaaaggttcccggagagactagcaatgat
gaccgggaggaagtgaggaacatcttggaccaagtagatgcatgtgacccatttagagtt
gctgtgacagtggagtccgcattatttgagaagcttggacgttctactggggcccagaag
gcaaaatataggtcaataatgtttaacctgagagcagataacaacactgatttccggaga
agagttctcattggtcaagtgaggcctgagaggcttccagacatatcccccgaagagatg
gctagtgatgcaaggaagcaagagaataaacagatcaaggcgaaggctctgtttgactgt
gagcgcggaggagcaccgaaggcaacaactgatcagttcaagtgtggcagatgtggccaa
cggaagacaacttactatcagctccagactcggagtgctgatgaaccgatgacaacattt
gtgacatgcgtgaactgcaacaatcactggaagttctgttga
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