KEGG   Panicum hallii (Hall's panicgrass): 112872693
Entry
112872693         CDS       T07366                                 
Name
(RefSeq) denticleless protein homolog
  KO
K11790  denticleless
Organism
phai  Panicum hallii (Hall's panicgrass)
Brite
KEGG Orthology (KO) [BR:phai00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:phai04121]
    112872693
Ubiquitin system [BR:phai04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     112872693
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st WDR55 Beta-prop_EML_2 Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 EIF3I Beta-prop_TEP1_C Beta-prop_EML Beta-prop_RIG_2nd Beta-prop_WDR75_1st Beta-prop_EIPR1 WD40_MABP1-WDR62_2nd Beta-prop_DCAF4 Beta-prop_WDR19_1st Beta-prop_SCAP Beta-prop_HPS5 Beta-prop_DCAF12 ANAPC4_WD40 Beta-prop_WDR90_POC16_2nd MIOS_WD40 Beta-prop_WDR11_1st Beta-prop_Vps41 WD40_RFWD3 Beta-prop_IFT140_1st Beta-prop_IFT122_1st Beta-prop_Nup120_160 Ge1_WD40
Other DBs
NCBI-GeneID: 112872693
NCBI-ProteinID: XP_025791548
LinkDB
Position
9:7537529..7541083
AA seq 525 aa
MSRRRLSPTFFGGLRGRELGGAGGSSSSRSTARLPYLADLSSDPGGRGGGVISVEHSGDP
AIPFAISFGKTAQTSNLLAVADEDGYVGLYDSRRRLPSSSSSLEKSAETRVSDWVAHNNA
IFDVCWIKEGSQILTASGDQTVKIWSVGNRKCIGVLSGHTGSVKSLSCHSSNPELIVSGS
RDGSFALWDLRCDPKSPNSHGETCLVSSAVVREAHSPVQRSRTRSRAKAASTSITSVLYL
KDGVSIATSGAADNVVKIWDTRNLKVPVSNKNSQAGGQPLKEGVKHGISCLSQDSYGAYI
AASCMDNRIYLYSVLHVKKGPVKVYTGSKIESFFVKSAISPDGNHILGGSSDGNVYLWQV
DQPENDPIVLKGHEGEATSVDWCASEVGMIATSSDDSTVRVWSTKKMDCTTVSSPTAIRK
RITAPNTEYRRSATHEQVTTSWDAVACTSADGKSPSGSHSPLQPRVLDFGTPESAKKRGF
ALFQEEALDTRKSPEAQMNSPSSVLSPPPSLKRRTIRDYFASSAS
NT seq 1578 nt   +upstreamnt  +downstreamnt
atgtcgcggcggcgcctctccccgaccttcttcggcgggctcaggggccgggagctcggc
ggcgccgggggatcctcctcctcccgctccacggcgcggctcccctacctcgccgacctc
tcctccgaccccggcggacgcggcggcggggtcatatccgtcgagcattccggtgacccc
gccatccccttcgccatctccttcggcaagactgctcagacctctaacctcctggcggtc
gccgacgaagacggctacgttggcctctacgacagccgccggcgcctcccgtccagctcc
tcgtccctagagaagtcagccgagacgagggtctccgattgggttgcccacaacaatgca
atctttgacgtgtgctggatcaaggagggatcccaaatactgactgcatcaggtgatcaa
actgtcaagatatggagtgtgggaaacaggaaatgcattggtgtcttgtcaggacacact
ggaagcgtgaagtcactttcatgccattcctcaaatcctgagcttattgtttccggttca
agggacggttcatttgccctttgggatttaagatgcgaccctaaatctccaaatagccat
ggtgaaacatgcctcgtgtcttctgctgttgtcagagaagcccacagccccgtccagagg
agtcgaacaaggtcccgggcaaaggcggcttcaacaagtatcacatcagttctttatctg
aaagatggtgtctctattgctacatctggagctgcagacaatgttgtgaaaatatgggat
acacggaacctgaaagtgccagtctccaataaaaattctcaagcaggggggcaacctttg
aaggagggggtgaaacatggcatatcttgcctatctcaagactcttatggtgcatacatt
gctgcatcatgtatggataacagaatctatttgtacagtgtgctccatgtgaaaaagggg
ccagtaaaggtttacactggcagcaaaatagagtctttctttgtcaagtctgctattagt
cctgatggaaatcacattcttggtggttcaagtgatggaaatgtatacttgtggcaggtg
gatcaacctgaaaatgaccctatagttctgaaaggccatgaaggtgaagcaacttcagtt
gactggtgtgcatcagaggttggaatgatagcaacatcttctgatgattctacggttcgc
gtgtggagtaccaagaaaatggactgcaccactgtaagctcaccaacagcgatccgcaag
cggataaccgcaccaaacactgagtatcgaagatctgccacccatgagcaagttaccacg
tcatgggacgctgttgcctgcaccagcgctgatggcaaatcaccaagtggctcccactct
cccctacagcctagagtgctggacttcggtactccagagtctgcaaagaagagaggcttt
gcactgttccaggaggaggcccttgacacaaggaagagtccagaggctcagatgaacagc
ccctcgtcggttctgagtccgccaccatccttgaaacggagaacgatccgggactacttt
gccagtagtgcttcctga

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