Panicum hallii (Hall's panicgrass): 112872693
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Entry
112872693 CDS
T07366
Name
(RefSeq) denticleless protein homolog
KO
K11790
denticleless
Organism
phai
Panicum hallii (Hall's panicgrass)
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
phai04121
]
112872693
Ubiquitin system [BR:
phai04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
112872693
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
WDR55
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_TEP1_C
Beta-prop_EML
Beta-prop_RIG_2nd
Beta-prop_WDR75_1st
Beta-prop_EIPR1
WD40_MABP1-WDR62_2nd
Beta-prop_DCAF4
Beta-prop_WDR19_1st
Beta-prop_SCAP
Beta-prop_HPS5
Beta-prop_DCAF12
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
MIOS_WD40
Beta-prop_WDR11_1st
Beta-prop_Vps41
WD40_RFWD3
Beta-prop_IFT140_1st
Beta-prop_IFT122_1st
Beta-prop_Nup120_160
Ge1_WD40
Motif
Other DBs
NCBI-GeneID:
112872693
NCBI-ProteinID:
XP_025791548
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Position
9:7537529..7541083
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AA seq
525 aa
AA seq
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MSRRRLSPTFFGGLRGRELGGAGGSSSSRSTARLPYLADLSSDPGGRGGGVISVEHSGDP
AIPFAISFGKTAQTSNLLAVADEDGYVGLYDSRRRLPSSSSSLEKSAETRVSDWVAHNNA
IFDVCWIKEGSQILTASGDQTVKIWSVGNRKCIGVLSGHTGSVKSLSCHSSNPELIVSGS
RDGSFALWDLRCDPKSPNSHGETCLVSSAVVREAHSPVQRSRTRSRAKAASTSITSVLYL
KDGVSIATSGAADNVVKIWDTRNLKVPVSNKNSQAGGQPLKEGVKHGISCLSQDSYGAYI
AASCMDNRIYLYSVLHVKKGPVKVYTGSKIESFFVKSAISPDGNHILGGSSDGNVYLWQV
DQPENDPIVLKGHEGEATSVDWCASEVGMIATSSDDSTVRVWSTKKMDCTTVSSPTAIRK
RITAPNTEYRRSATHEQVTTSWDAVACTSADGKSPSGSHSPLQPRVLDFGTPESAKKRGF
ALFQEEALDTRKSPEAQMNSPSSVLSPPPSLKRRTIRDYFASSAS
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcggcggcgcctctccccgaccttcttcggcgggctcaggggccgggagctcggc
ggcgccgggggatcctcctcctcccgctccacggcgcggctcccctacctcgccgacctc
tcctccgaccccggcggacgcggcggcggggtcatatccgtcgagcattccggtgacccc
gccatccccttcgccatctccttcggcaagactgctcagacctctaacctcctggcggtc
gccgacgaagacggctacgttggcctctacgacagccgccggcgcctcccgtccagctcc
tcgtccctagagaagtcagccgagacgagggtctccgattgggttgcccacaacaatgca
atctttgacgtgtgctggatcaaggagggatcccaaatactgactgcatcaggtgatcaa
actgtcaagatatggagtgtgggaaacaggaaatgcattggtgtcttgtcaggacacact
ggaagcgtgaagtcactttcatgccattcctcaaatcctgagcttattgtttccggttca
agggacggttcatttgccctttgggatttaagatgcgaccctaaatctccaaatagccat
ggtgaaacatgcctcgtgtcttctgctgttgtcagagaagcccacagccccgtccagagg
agtcgaacaaggtcccgggcaaaggcggcttcaacaagtatcacatcagttctttatctg
aaagatggtgtctctattgctacatctggagctgcagacaatgttgtgaaaatatgggat
acacggaacctgaaagtgccagtctccaataaaaattctcaagcaggggggcaacctttg
aaggagggggtgaaacatggcatatcttgcctatctcaagactcttatggtgcatacatt
gctgcatcatgtatggataacagaatctatttgtacagtgtgctccatgtgaaaaagggg
ccagtaaaggtttacactggcagcaaaatagagtctttctttgtcaagtctgctattagt
cctgatggaaatcacattcttggtggttcaagtgatggaaatgtatacttgtggcaggtg
gatcaacctgaaaatgaccctatagttctgaaaggccatgaaggtgaagcaacttcagtt
gactggtgtgcatcagaggttggaatgatagcaacatcttctgatgattctacggttcgc
gtgtggagtaccaagaaaatggactgcaccactgtaagctcaccaacagcgatccgcaag
cggataaccgcaccaaacactgagtatcgaagatctgccacccatgagcaagttaccacg
tcatgggacgctgttgcctgcaccagcgctgatggcaaatcaccaagtggctcccactct
cccctacagcctagagtgctggacttcggtactccagagtctgcaaagaagagaggcttt
gcactgttccaggaggaggcccttgacacaaggaagagtccagaggctcagatgaacagc
ccctcgtcggttctgagtccgccaccatccttgaaacggagaacgatccgggactacttt
gccagtagtgcttcctga
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