Panicum hallii (Hall's panicgrass): 112872819
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Entry
112872819 CDS
T07366
Name
(RefSeq) uncharacterized protein LOC112872819
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
phai
Panicum hallii (Hall's panicgrass)
Pathway
phai04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
112872819
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
phai04121
]
112872819
Enzymes [BR:
phai01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
112872819
Ubiquitin system [BR:
phai04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
112872819
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_ZnF
Motif
Other DBs
NCBI-GeneID:
112872819
NCBI-ProteinID:
XP_025791645
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All DBs
Position
9:complement(13851181..13854283)
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AA seq
297 aa
AA seq
DB search
MARGGGGAPASPAPARGKDRRHLYRPPPKRSPAQEGIPAGRWRARPKQQEAERAGLAHRR
GQARAARRRGKRRRARGRRSWLRRRCRGSGGDGRSHGGAAAQQFEDGTRLVPLPSLPASP
TNLPRSSASHGQACGGAATYAACAEVDAFVPDAKLPVPFQEHGCASYVVYYQASDHERAR
RWAPCYCPDLGCGAFTSPPRLFEHFHAGHPTWPVTDVSYGKPCRIAVPRSPQGLHVLVGQ
EDRFSTGCRPSFMDCMAAEGNQSSSLTRLGLTIPPAAFLRPTSSTTAGRQRSRNGLG
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
atggcaaggggaggaggtggcgccccggcgtcgcccgcacccgcgcgcggcaaggaccgg
cggcacctgtacaggccgccgccgaagaggtcaccagcacaagaggggatccctgctgga
cgatggcgagcccgcccaaagcagcaagaagccgagagggcaggcctagcccaccgccgt
ggtcaagcgcgagctgccagaaggagggggaagaggaggagagctagaggaaggagaagc
tggctaaggcggcggtgccggggctctggtggcgatggaagaagtcatggaggagccgca
gctcaacaatttgaggatgggactcgccttgttccattgccgagcttgcctgcttcccca
acaaacctcccacgttcaagtgcgagccacggccaggcgtgcggcggcgccgccacctac
gccgcctgcgccgaggtggacgccttcgtgcccgacgccaagctgcccgtcccgttccag
gagcacgggtgcgcgagctacgtcgtctactaccaggccagcgaccacgagcgcgcgcgc
cggtgggctccctgctactgccctgacctcggctgcggcgccttcacctcgccaccgagg
ctgtttgagcacttccacgcgggccacccgacctggcccgtcaccgacgtgagctacggg
aagccgtgcaggatcgccgtgccacgttcgccgcagggcctgcacgtcctcgtcggtcag
gaggaccggttctcaactggatgcagaccaagcttcatggattgcatggcggcagaagga
aatcagagttcatcgctgacccggcttggcttgacgattcctccagcggccttcctcaga
ccgacaagctcaacgacggctggacggcagcggtctcggaacggtttgggatga
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