Panicum hallii (Hall's panicgrass): 112872838
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Entry
112872838 CDS
T07366
Name
(RefSeq) phosphomethylpyrimidine synthase, chloroplastic
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
phai
Panicum hallii (Hall's panicgrass)
Pathway
phai00730
Thiamine metabolism
phai01100
Metabolic pathways
phai01240
Biosynthesis of cofactors
Module
phai_M00897
Thiamine biosynthesis, plants, AIR (+ NAD+) => TMP/thiamine/TPP
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
112872838
Enzymes [BR:
phai01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
112872838
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Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
Motif
Other DBs
NCBI-GeneID:
112872838
NCBI-ProteinID:
XP_025791662
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Position
9:complement(8240720..8246778)
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AA seq
642 aa
AA seq
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MAALQPSFSSTMALRSSGSSLKFPKTALLPGFGGISRQDMQDRNASLACLIPKVASVTDQ
SIAEPSKPRKNKHTVDPTAPEFLPLPSFEECFPRSTKESSEIVHEESGHVLKVPFRRVHL
TGDQKHFDTYDTSGPQNISPRTGLPKIRKEWIDRREKLGSPRYTQMYYAKQGIITEEMIY
CAKRENLSPEFVRTEVARGRAIIPSNKRHLELEPTIIGRNFLVKVNANIGNSAVVSSIEE
EVHKLQWATMWGADTVMDLSTGQHIHETREWIIRNSPVPIGTVPIYQALEKVNGIAENLS
WEIFRDTLIEQAEQGVDYFTIHAGVLLRYIPLTAKRMTGIVSRGGSIHAKWCLTYHKENF
AYEHWDDILDICNQYDVALSIGDGLRPGSIYDANDSAQFAELLTQGELTRRAWAKDVQVM
NEGPGHIPMHKIPENMEKQLEWCNEAPFYTLGPLTTDIAPGYDHITSAIGAANIGALGTA
LLCYVTPKEHLGLPNRDDVKTGVISYKIAAHAADLAKGHPYAQAWDDALSKARFEFRWLD
QFALSLDPVTAMSFHDETLPSEGAKVAHFCSMCGPKFCSMKITEDIRKYADEHGYGTVEE
AVKEGMNAMSAEFLAARKTVSGEQHGEAGGEIYVPESYAAHK
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atggctgcgcttcaaccctcattttcatcgacaatggctctgaggagtagcggcagcagt
ctgaagttccccaaaactgcacttctacctggttttggtggcatttcacgtcaagacatg
caagacaggaatgctagcctcgcttgtttaatccccaaggttgcttcggtaactgaccag
tcaatagcagaaccatcaaaacccaggaaaaataagcacactgtcgaccctacagcacca
gaatttctgccactcccatcatttgaagaatgctttccaagaagtacaaaagaatcaagt
gaaatcgttcacgaggaatctggtcatgtcctcaaggtcccattccggagagtccatttg
actggagatcagaagcactttgacacatatgacaccagtggtcctcaaaatataagtcca
aggactggactcccaaagataaggaaggaatggattgataggagggaaaagctgggtagt
cctcgttacacgcaaatgtattatgctaaacagggaatcataacagaggagatgatatac
tgtgccaagcgtgagaaccttagtcctgaatttgttcggacagaagttgcccgtggacga
gccataattccttcaaacaagaggcacctggaattggaacccacgattattggaagaaac
ttccttgtaaaggtgaatgcaaatattgggaattcagctgttgtgagctccatcgaggag
gaagttcacaagctccagtgggccacaatgtggggagctgatactgtcatggatctttca
acagggcagcatatccatgagacccgggaatggattattcgcaactctccggttcctatt
gggactgttcctatttaccaagcacttgagaaagtaaatggtattgcagaaaatctgagc
tgggaaatctttagggataccttgattgaacaagctgagcagggtgttgattacttcaca
atccatgctggtgtcctgctccgttacattcctcttacagcaaagagaatgactggcata
gtttcgcgtggcggctcaattcatgcaaaatggtgcttaacttatcacaaggagaacttt
gcttatgaacactgggatgacattcttgacatatgcaatcaatatgatgtggcattatca
attggtgatggtttgaggcctggttctatttatgacgcaaatgatagtgctcagttcgca
gagctgttgactcaaggggaacttacacgtcgagcatgggcgaaagatgtgcaggtgatg
aatgaaggcccagggcacatcccaatgcataaaattcctgaaaacatggagaaacagctg
gagtggtgtaatgaagcacctttctatacgttgggtccactgacaactgatattgcacct
ggttatgatcacatcacctcagccattggtgctgccaacattggagctcttggcactgca
cttctttgttatgtaacaccaaaggagcaccttgggttgcctaatcgtgatgatgttaag
acaggtgtgatatcctacaaaattgctgctcatgctgctgatttggcaaagggtcatccc
tatgcgcaagcttgggatgatgcccttagcaaggcaaggtttgagtttagatggctggat
caatttgctctatcgctggacccagtaactgccatgtctttccatgatgaaacattgcca
tccgagggtgccaaagttgcgcatttctgctcaatgtgtgggcccaagttttgttcgatg
aaaatcacagaggatattagaaagtatgcggatgaacatggttacggaacagtagaggaa
gctgtgaaggaaggaatgaatgctatgagtgctgaatttttggctgcaaggaagacagtt
agcggggaacagcatggtgaagctggaggggagatctacgtaccagaaagctatgcagct
cacaaatga
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