Panicum hallii (Hall's panicgrass): 112872937
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Entry
112872937 CDS
T07366
Name
(RefSeq) serine/threonine-protein kinase ATG1c-like isoform X1
KO
K08269
serine/threonine-protein kinase ULK2 [EC:
2.7.11.1
]
Organism
phai
Panicum hallii (Hall's panicgrass)
Pathway
phai04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
112872937
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
phai01001
]
112872937
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
phai04131
]
112872937
03029 Mitochondrial biogenesis [BR:
phai03029
]
112872937
Enzymes [BR:
phai01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
112872937
Protein kinases [BR:
phai01001
]
Serine/threonine kinases: Other
ULK family [OT]
112872937
Membrane trafficking [BR:
phai04131
]
Autophagy
Autophagosome formation proteins
Atg1 complex
112872937
Mitochondrial biogenesis [BR:
phai03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
112872937
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pkinase
PK_Tyr_Ser-Thr
MIT_ATG1
ABC1
Kdo
ATG1-like_MIT2
Pkinase_fungal
YrbL-PhoP_reg
APH
Pox_ser-thr_kin
Motif
Other DBs
NCBI-GeneID:
112872937
NCBI-ProteinID:
XP_025791755
LinkDB
All DBs
Position
9:65850473..65856519
Genome browser
AA seq
704 aa
AA seq
DB search
MGDGASGRGGGGGGGRRVGEYELLRPIGSGAYSQVWLGRHQERGTEVAVKEIAMERLSRK
LRESLLSEVDILRRIRHPNVIALHDSVKDHGRIYLILEYCRGGDLHAYLQRHKRVSETVA
KHFIRQLASGLQMLRDNNVVHRDLKPQNILLVENNENSLLKIADFGFAKFLQPFALAETL
CGSPLYMAPEVMQAQKYDAKADLWSVGVILYQLVTGIPPFNGDNQIQLLKNILRSREIQF
PSDCELSHGCIDLCRKLLRLNSVERLTVEEFVHHPFLSEHAPERTLSRTPSDIRDLPSSQ
SSQEDCMPFPLDDESSGQDESPVPDSKSPMKSYGFPMGKRLDKTSGQSPSKHIGLFSRYV
LGNNHPPSSQHHDHAGKKTKESNIDEVQGRKGGYPEDSPIIDSLEFVDQEYVFVSGPLPE
GSSSSTNASRQLNLPAKYDNSSVSPPKLTLSSAPMPINGVPFNRQQSAGTGSLDSHCSPA
SGTSQGSADMSDAIDQPPSDYLTRIRLLEQYASAIAGLVKDEIKAGRHLEAFSIQLIVLA
TWKQAIHLCNTFVASAARESPSQDIPMKGLCADVPHLLANSQLVDDACMQIERQFLSDVE
YAEELASTVGQIADGTEMPDAIEIIFQSALHIGRRGGVDEMFGKAADAKTGYTRAVSMLR
FLLIEAPLLALNPPLTLTRSDRHRLRTYIEALNTRLGQMHSQSH
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
atgggggacggcgccagcggccggggcggcgggggcggcggcgggcggcgggtgggggag
tacgagctgctgcggccgatcgggtcgggggcgtactcgcaggtgtggctgggacggcac
caggagcggggcacggaggtggcggtgaaggagatcgccatggagcggctcagcaggaag
ctccgcgagagcctcctctccgaggtcgacatcctccgccgcatccgacaccccaacgtc
atcgcactccacgactccgtcaaggatcatgggaggatatatctcatattggagtattgc
cgaggtggtgacttacatgcataccttcaacggcataaaagagtttctgaaacagttgca
aagcatttcatccgtcagttagcatctggtctgcaaatgcttcgtgacaataacgtggtt
catcgagacctaaaacctcagaacattcttcttgttgaaaacaatgaaaattctctgttg
aagattgccgactttggatttgcaaagtttttgcaaccatttgcccttgctgaaacactt
tgtggttcaccactttacatggctccagaagtcatgcaagcacagaagtatgatgcaaag
gcagatctatggagtgtgggtgtcattctctatcaacttgttaccggaattccacctttt
aatggggataatcagatccagctgcttaaaaatatactcaggtcacgtgaaatacaattc
ccatctgattgtgagttgagccatggttgcattgatttgtgcagaaagttgctgcgactc
aattcagtggagcggcttacagttgaagaatttgtgcatcacccatttctttctgaacat
gctccagagaggaccttgagccggacaccatctgacattagagatttgccttcaagccaa
agttctcaagaagattgtatgccttttcctttggatgatgagtcaagtggacaggatgag
agtccagttcctgacagtaaaagtccgatgaaatcttatgggttccccatgggtaaaaga
ttggacaaaacttcaggccagagtccatcgaaacatattggtctgttctccagatatgtc
ttgggtaataatcatcctcctagtagccaacaccatgaccatgctggtaaaaagaccaag
gaaagcaatattgatgaagtacaaggtcgtaaaggtggttatcctgaagattcccctatc
attgattcattagagtttgtagatcaggaatatgtctttgtgtctggaccactcccagag
ggttcatcttcttcaacaaatgcctctcgacagctgaacttgccagcaaaatacgataat
tcatctgtttcgccacccaagttgactttatcgagtgcaccaatgccgataaatggtgtg
ccgtttaatagacaacaatctgctgggactggtagcttggatagccactgttctccagca
tctggcacttcacagggatccgcagatatgagtgatgccattgatcagcccccatctgat
tatctgacaaggattagattgttggagcagtatgcatcagccatagcagggttggtcaaa
gatgagatcaaagctggcagacacttggaggcattctctattcagctaattgttcttgca
acctggaagcaagcaattcatttatgcaatacgtttgtagcttcagctgcaagagagtct
ccttcccaggatatccctatgaaggggctatgtgctgatgttccccatttgcttgcaaac
tctcagctggttgatgatgcctgcatgcagatagagagacagtttctctctgatgttgaa
tatgctgaagaactagccagcactgtaggacagatagctgatggtacagagatgcctgat
gcgattgaaataatatttcagtctgccttacatataggaagacgtggtggtgtcgatgag
atgttcgggaaagcagcagatgccaagactgggtatacgagggcggtatccatgctgcgg
tttctcctgatcgaggcaccattactggccctcaacccccctttgactctgacaagatct
gatcggcatcgtctgcgcacatatatcgaagctctcaacaccaggcttggccagatgcac
agccagagccattag
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